P53044 (UFD1_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Ubiquitin fusion degradation protein 1 UniProtKBInterProSTRINGInteractive Modelling

361 aa; Sequence (Fasta) ; 10 identical sequences: Saccharomyces cerevisiae: N1P5Q9, G2WED7, C8Z8U3, C7GXN3, B5VJ00, A0A6A5PX57, A6ZV35, B3LIH3; Saccharomyces boulardii: A0A0L8VR50; Saccharomyces cerevisiae x Saccharomyces kudriavzevii: H0GGH8

Available Structures

8 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to two folded ubiquitin moieties and one unf…
8dau
 Heteromer
P0CG63; P25694; P33755; 		228-311
5×ATP; 7×ADP; 2×ZN;
Assess
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to three ubiquitin moieties and one unfolded…
8daw
 Heteromer
P0CG63; P25694; P33755; 		228-311
5×ATP; 7×ADP; 2×ZN;
Assess
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to two ubiquitin moieties and one unfolded u…
8dav
 Heteromer
P0CG63; P25694; P33755; 		228-311
5×ATP; 7×ADP; 2×ZN;
Assess
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex unbound but in the presence of SUMO-ubiquitin(K48p…
8dar
 Heteromer
P25694; P33755; 		228-310
6×ATP; 6×ADP; 2×ZN;
Assess
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to two ubiquitin moieties in presence of SUM…
8das
 Heteromer
P0CH08; P25694; P33755; 		230-310
5×ATP; 7×ADP; 2×ZN;
Assess
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to three ubiquitin moieties in presence of S…
8dat
 Heteromer
P0CG63; P25694; P33755; 		230-310
5×ATP; 7×ADP; 2×ZN;
Assess
Npl4 in complex with Ufd1
6jwj
 Heteromer
P33755; 		288-305
2×ZN; 11×GOL;
Assess
Ufd1 exhibits the AAA-ATPase fold with two distinct ubiquitin interaction sites
1zc1
monomer1-208
Assess

3 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
1zc1.1.Amonomer0.801-207
100.00
Assess
8dar.1.Hmonomer0.55228-310
100.00
Assess
7lmy.1.Amonomer0.5282-163
28.57
Assess