P53355 | SWISS-MODEL Repository

P53355 (DAPK1_HUMAN) Homo sapiens (Human)

Death-associated protein kinase 1 UniProtKB InterPro STRING Interactive Modelling

1430 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4)

It is possible new templates exist for this target since these models were created.

Available Structures

65 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
X-RAY STRUCTURE OF A DAP-KINASE CALMODULIN COMPLEX	2x0g SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P0DP23;	3-320	2×SO4; 4×CA;
Assess
1.7-A structure of calmodulin bound to a peptide from DAP kinase	1yr5 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P0DP23;	302-320	4×CA;
Assess
CRYSTAL STRUCTURE OF HUMAN CALMODULIN IN COMPLEX WITH A DAP KINASE-1 MUTANT (W305Y) PEPTIDE	2y4v SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P0DP23;	304-319	4×CA;
Assess
Crystal structure of the kelch domain of human KLHL20 in complex with DAPK1 peptide	6gy5 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer Q9Y2M5;	1334-1344	1×CL; 9×EDO; 14×NA;
Assess
Dimeric structure of DAPK-1 catalytic domain	2y4p SMTL PDBe PDBe-KB PDBj PDBsum RCSB	homo-2-mer	2-276
Assess
Dimeric structure of DAPK-1 catalytic domain in complex with AMPPCP- Mg	3zxt SMTL PDBe PDBe-KB PDBj PDBsum RCSB	homo-2-mer	7-276	2×ACP; 4×MG;
Assess
Death associated protein kinase 1 residues 1-312	2xzs SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	4-312	1×MG;
Assess
Death-associated Protein Kinase 1 (DAPK1) catalytic and auto-regulatory domains with S289A and S308…	6fhb SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-302	5×CL; 1×ACT; 1×MG; 1×PEG; 1×GOL;
Assess
Crystal structure of a DAP-kinase 1 mutant	2xuu SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-302	1×ADP; 3×SO4; 1×MG;
Assess
X-ray structure of a DAP-Kinase 2-302	2w4k SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-302	1×ADP; 1×MG;
Assess
Structure of a semisynthetic phosphorylated DAPK	4uv0 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	3-302	1×PGE;
Assess
Structure of DAPK1 construct residues 1-304	2y0a SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	3-302	1×MES;
Assess
Crystal structure of death-associated protein kinase 1 with a crucial phosphomimicking mutation	4tl0 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-301	1×MG; 3×NH4; 2×GOL;
Assess
CRYSTAL STRUCTURE OF AN ARD DAP-KINASE 1 MUTANT	4b4l SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	5-303	3×1PE; 7×SO4;
Assess
Death-associated Protein Kinase 1 (DAPK1) catalytic and auto-regulatory domains with S289E and S308…	6qmo SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	4-302	6×GOL; 5×CL; 1×PGE;
Assess
Death-associated Protein Kinase 1 (DAPK1) catalytic and auto-regulatory domains with S289A and S308…	6fha SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	4-302
Assess
1.5A X-RAY STRUCTURE OF APO FORM OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE	1jks SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-294
Assess
1.6A X-RAY STRUCTURE OF BINARY COMPLEX OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE WIT…	1jkl SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-294	1×ANP;
Assess
1.8A X-Ray structure of ternary complex of a catalytic domain of death-associated protein kinase wi…	1ig1 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-294	1×MN; 1×ANP;
Assess
DEATH ASSOCIATED PROTEIN KINASE CATALYTIC DOMAIN WITH BOUND INHIBITOR FRAGMENT	1p4f SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-293	1×86Q;
Assess
2.4A X-RAY STRUCTURE OF TERNARY COMPLEX OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE WI…	1jkk SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-293	1×MG; 1×ANP;
Assess
Crystal structure of DAPKQ23V-AMPPNP	3gu4 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285	1×ANP;
Assess
Crystal Structure of DAPK1 catalytic domain in complex with the hinge binding fragment 4-methylpyri…	4ypd SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285	1×CL; 1×SO4; 1×DKG;
Assess
Crystal structure of DAPKQ23V-ADP	3gu6 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285	1×ADP;
Assess
Crystal structure of death associated protein kinase complexed with AMPPNP	3eha SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285	1×ANP;
Assess
Crystal structure of DAPKL93G with N6-cyclopentyladenosine	3gu8 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285	1×3GU;
Assess
Crystal Structure of DAPK1 catalytic domain in complex with the hinge binding fragment phthalazine	4yo4 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285	4×CL; 1×ACT; 1×SO4; 1×4FT;
Assess
Crystal structure of DAPKQ23V-AMPPNP-Mg2+	3gu5 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285	1×MG; 1×ANP;
Assess
Crystal structure of death associated protein kinase complexed with ADP	3eh9 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285	1×ADP; 2×SO4;
Assess
Crystal structure of a glycine-rich loop mutant of the death associated protein kinase catalytic do…	3dgk SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285
Assess
Crystal structure of DAPKL93G complexed with N6-(2-Phenylethyl)adenosine	3gub SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285	1×GUB; 1×SO4;
Assess
Crystal structure of death associated protein kinase in complex with ADP and Mg2+	3f5g SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285	1×ADP; 1×MG;
Assess
Crystal structure of DAPKQ23V-ADP-Mg2+	3gu7 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285	1×ADP; 1×MG;
Assess
Crystal structure of a glycine-rich loop mutant of the death associated protein kinase catalytic do…	3dfc SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285	1×ANP;
Assess
Crystal structure of the death associated protein kinase in complex with AMPPNP and Mg2+	3f5u SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-285	1×ANP; 1×MG; 1×SO4;
Assess
1.1A X-RAY STRUCTURE OF THE APO CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE 1, aa 1-277	4pf4 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-277	4×SO4; 2×NA; 6×GOL; 1×MG;
Assess
Structure of death-associated protein Kinase 1 (dapk1) in complex with a ruthenium octasporine liga…	2yak SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-278	1×OSV;
Assess
X-ray structure of a DAP-Kinase 2-277	2w4j SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×ADP; 1×ACT; 1×MG;
Assess
Crystal structure of DAPK1-genistein complex in the presence of bromide ions.	5av4 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×GEN; 4×BR;
Assess
Crystal structure of death-associated protein kinase 1 in complex with resveratrol and MES	7ccw SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×STL; 1×MES; 3×SO4;
Assess
Crystal structure of DAPK1 in complex with quercetin.	5auw SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×QUE;
Assess
Crystal structure of DAPK1 in complex with kaempferol.	5aux SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×KMP; 1×CL;
Assess
Crystal structure of DAPK1 in complex with apigenin.	5auv SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×AGI; 1×CL;
Assess
Crystal structure of DAPK1 in the presence of bromide ions.	5av1 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	7×BR;
Assess
Crystal structure of DAPK1-kaempferol complex in the presence of bromide ions.	5av2 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×KMP; 7×BR;
Assess
Crystal structure of DAPK1 in complex with genistein.	5auz SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×GEN;
Assess
Crystal structure of death-associated protein kinase 1 in complex with resveratrol	7ccu SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×STL; 1×SO4;
Assess
Crystal structure of DAPK1 in complex with luteolin.	5auu SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×LU2;
Assess
Crystal structure of DAPK1 in complex with ANS.	5aut SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×2AN;
Assess
Crystal structure of DAPK1 in complex with pinostilbene	8ie6 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×8KZ; 2×SO4;
Assess
Crystal structure of DAPK1 in complex with isorhapontigenin	8ie8 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×P5O; 2×SO4;
Assess
Crystal structure of death-associated protein kinase 1 in complex with piceatannol	7ccv SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×PIT; 1×SO4;
Assess
Crystal structure of apo DAPK1 in the presence of 18-crown-6	6in4 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×SO4;
Assess
Crystal structure of DAPK1 in complex with oxyresveratrol	8ie5 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×EZE; 1×SO4;
Assess
Crystal structure of DAPK1 in complex with pterostilbene	8ie7 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×3RL; 2×SO4;
Assess
Crystal structure of DAPK1 in complex with 7,3',4'-trihydroxyisoflavone.	5av0 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×47X;
Assess
Crystal structure of DAPK1-kaempferol complex in the presence of iodide ions.	5av3 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×KMP; 9×IOD;
Assess
Crystal structure of DAPK1 in complex with purpurin	6aar SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×9TF;
Assess
Crystal Structure of DAPK1 kinase domain in complex with a small molecule inhibitor	4txc SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×38G; 6×EDO;
Assess
Crystal structure of DAPK1 in complex with morin.	5auy SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	1×MRI;
Assess
Death-associated Protein Kinase 1 (DAPK1) catalytic and auto-regulatory domains with S289E and S308…	6qn4 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277	7×ACT; 4×GOL; 1×NA;
Assess
TETRAGONAL CRYSTAL FORM OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE	1jkt SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-277
Assess
Crystal structures of kinase domain of DAP kinase in complex with small molecular inhibitors	1wvw SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-276
Assess
Crystal structures of kinase domain of DAP kinase in complex with small molecular inhibitors	1wvx SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-276	1×BD4;
Assess
Crystal structures of kinase domain of DAP kinase in complex with small molecular inhibitors	1wvy SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	4-276	1×STU;
Assess

7 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
4tl0.1.A	monomer	0.78	2-301	1×MG;	99.70
Assess
5lec.1.A	monomer	0.68	337-669		32.63
Assess
5y4d.1.A	monomer	0.67	332-712		27.81
Assess
5leb.1.A	monomer	0.65	341-712		31.70
Assess
8uso.1.A	monomer	0.62	9-366		33.33
Assess
3soa.1.A	monomer	0.60	7-365		30.79
Assess
8jfk.1.J	monomer	0.59	6-359		32.83
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

24 SWISS-MODEL models built on isoform sequence

Template	Isoform	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	4qfv.2.A	homo-2-mer	0.79	1-223		39.01
Assess
Isoform 2	5le7.2.A	monomer	0.79	2-225		35.71
Assess
Isoform 2	5le4.1.A	monomer	0.78	3-224		36.04
Assess
Isoform 2	4o60.1.A	homo-2-mer	0.77	2-221		38.18
Assess
Isoform 2	5le9.1.A	monomer	0.77	1-223		35.43
Assess
Isoform 2	5led.1.A	monomer	0.76	3-228		36.28
Assess
Isoform 2	5lea.1.A	monomer	0.76	2-224		36.32
Assess
Isoform 2	5le3.3.A	monomer	0.72	1-224		33.93
Assess
Isoform 3	4tl0.1.A	monomer	0.78	2-301	1×MG;	99.70
Assess
Isoform 3	5lec.1.A	monomer	0.68	337-669		32.63
Assess
Isoform 3	5y4d.1.A	monomer	0.67	332-712		27.81
Assess
Isoform 3	5leb.1.A	monomer	0.65	341-712		31.70
Assess
Isoform 3	8uso.1.A	monomer	0.62	9-366		33.33
Assess
Isoform 3	3soa.1.A	monomer	0.60	7-365		30.79
Assess
Isoform 3	8jfk.1.J	monomer	0.59	6-359		32.83
Assess
Isoform 3	5vkq.1.A	monomer	0.50	341-712		23.33
Assess
Isoform 3	8pwl.1.A	monomer	0.50	337-667		22.87
Assess
Isoform 4	2x0g.1.A	monomer	0.78	3-320		100.00
Assess
Isoform 4	5lec.1.A	monomer	0.69	338-670		32.63
Assess
Isoform 4	5y4d.1.A	monomer	0.67	332-712		27.81
Assess
Isoform 4	5leb.1.A	monomer	0.65	341-712		31.70
Assess
Isoform 4	8uso.1.B	monomer	0.61	6-366		33.33
Assess
Isoform 4	3soa.1.A	monomer	0.61	7-365		31.38
Assess
Isoform 4	5vkq.1.A	monomer	0.53	341-670		23.45
Assess

P53355 (DAPK1_HUMAN) Homo sapiens (Human)

Death-associated protein kinase 1 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

65 Experimental Structures

7 SWISS-MODEL models

24 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

Death-associated protein kinase 1 UniProtKB InterPro STRING Interactive Modelling