P56761 (PSBD_ARATH) Arabidopsis thaliana (Mouse-ear cress)
Photosystem II D2 protein UniProtKBAFDB90v4InterProSTRINGInteractive Modelling
353 aa; Sequence (Fasta) ;
229 identical sequences 229 identical sequences
Descurainia erodiifolia: A0A6M8YPN1; Schrenkiella parvula: A0A0U2JIX2; Eutrema halophilum: A0A0X9RWM2; Smelowskia calycina: A0A6M8ZDS6; Arabidopsis halleri subsp. ovirensis: A0A175DB71; Arabidopsis croatica: A0A175D9A4; Yinshania furcatopilosa: A0A6M8ZJS1; Yinshania acutangula: A0A6M8ZKG0; Hilliella paradoxa: A0A6M8YPR5; Draba oligosperma: A0A6M8YS43; Brassica rapa subsp. chinensis: A0A249RQ65; Camelina sativa: A0A0U5JCI4; Descurainia sophia: A0A6M8YR35; Draba aizoides: A0A6M8YR33; Arabidopsis petraea subsp. septentrionalis: A0A175DKE3; Yinshania henryi: A0A6M8ZJQ3; Capsella rubella: A0A0U2EYC8; Pseudoturritis turrita: A0A6M8ZAN8; Fourraea alpina: A0A6M8YX28; Arabidopsis lyrata subsp. lyrata: D7KRB9; Arabidopsis halleri subsp. halleri: A0A0U5J9A9; Arabidopsis halleri: A0A1U9S0V0; Ostrya rehderiana: A0A0P0KLX6; Arabis hirsuta: A0A2Z5X9X4; Arabis flagellosa: A0A2Z5XA74; Delpinophytum patagonicum: A0A6M8YVA0; Eutrema japonicum: A0A5H2YGK0; Parrya pinnatifida: A0A6M8ZA11; Eutrema salsugineum: A0A0U2KB26; Stanleya pinnata: A0A6M8ZG94; Sisymbrium altissimum: A0A6M8ZDM8; Guiraoa arvensis: A0A6M8YW80; Crambe kralikii: A0A6M8YKF8; Calepina irregularis: A0A6M8YJW6; Orychophragmus violaceus: A0A1S5SJR3; Arabidopsis halleri subsp. tatrica: A0A175DBN4; Arabidopsis halleri subsp. dacica: A0A175D9S5; Cochlearia groenlandica: A0A3P3X3R1; Petrocallis pyrenaica: A0A6M8ZA58; Subularia aquatica: A0A6M8ZD06; Schimpera arabica: A0A6M8ZEG5; Parolinia ornata: A0A6M8Z980; Parodiodoxa chionophila: A0A6M8Z7I1; Ochthodium aegyptiacum: A0A6M8Z705; Horwoodia dicksoniae: A0A6M8YNX0; Henophyton deserti: A0A6M8YTL1; Anastatica hierochuntica: A0A220N9Y0; Arabidopsis kamchatica subsp. kawasakiana: A0A175DCM7; Arabidopsis halleri subsp. gemmifera: A0A175DA92; Arabidopsis lyrata subsp. petraea: A0A175DGZ4; Mostacillastrum orbignyanum: A0A6M8Z491; Robeschia schimperii: A0A6M8ZBP0; Arabis verna: A0A6M8YPT0; Arabis paniculata: A0A7M1LBD1; Hurkaea josiae: A0A6M8YFE0; Pugionium cornutum: A0A191UQU7; Cakile lanceolata: A0A858TGU2; Schizopetalon walkeri: A0A6M8ZH82; Sarcodraba karraikensis: A0A6M8ZE58; Mathewsia auriculata: A0A6M8Z1M8; Pugionium pterocarpum: A0A6M8Z9F0; Litwinowia tenuissima: A0A6M8Z173; Eutrema botschantzevii: A0A0X9UDG6; Aphragmus involucratus: A0A6M8Y844; Atacama nivea: A0A6M8ZKG1; Eudema nubigena: A0A6M8YM78; Streptanthus cooperi: A0A6M8ZDW6; Brassica carinata: A0A249RV53; Smelowskia altaica: A0A6M8ZCC8; Brassica rapa subsp. pekinensis: A0A249RRE6; Brassica rapa subsp. rapa: A0A249RQ39; Arabis scabra: A0A6H0MYF1; Arabis alpina: W0USU9; Pugionium dolabratum: A0A191UQL1; Clypeola jonthlaspi: A0A6M8YME6; Asperuginoides axillaris: A0A6M8YL78; Meniocus linifolius: A0A6M8YJ89; Alyssum desertorum: A0A1U9XLI9; Alyssum dasycarpum: A0A6M8Y7M3; Arabidopsis neglecta: A0A175DJB9; Arabidopsis suecica: A0A175DN38; Arabidopsis pedemontana: A0A0U5CLC7; Isatis minima: A0A8F9WKG9; Arabidopsis arenosa: A0A0U5J5Q5; Sisymbrium irio: A0A348AZC7; Sinapis alba: A0A6C0M6T8; Raphanus sativus: A0A068L8I7; Crambe hispanica subsp. abyssinica: A0A2R3ECL5; Capsella bursa-pastoris: A4QKI7, A0A109RTK3; Brassica oleracea var. capitata: A0A0H3XZP4; Brassica oleracea var. botrytis: A0A249RRD9; Brassica oleracea: A0A411D976; Brassica campestris: A0A249RPF3; Brassica nigra: A0A191SEU8; Brassica napus: D1L8N3; Brassica juncea: A0A0P0JWW9; Arabidopsis thaliana: A0A1B1W4U0; Plagioloba crenulata: A0A6M8ZLC7; Pseudocamelina glaucophylla: A0A6M8Z891; Notoceras bicorne: A0A6M8Z6R2; Morettia canescens: A0A220NCD1; Brassica oleracea var. italica: A0A249RRY4; Thelypodium laciniatum: A0A6M8ZHL5; Myagrum perfoliatum: A0A6M8Z482; Goldbachia laevigata: A0A6M8YT49; Diptychocarpus strictus: A0A6M8YSL2; Aubrieta parviflora: A0A6M8YE61; Lobularia libyca: A0A220NCF7; Chorispora tenella: A0A109RU30; Cardamine fallax: A0A8F2JDU3; Cardamine parviflora: A0A2K9RHY5; Cakile edentula: A0A858TDF2; Eutrema yunnanense: A0A0U2SAP3; Eutrema tenue: A0A5H2YIX0; Smelowskia integrifolia: A0A6M8YRY7; Eutrema heterophyllum: A0A0U2SJ90; Arabidopsis arenicola: A0A175D333; Erysimum cheiranthoides: A0A6B9VJV9; Raphanus raphanistrum subsp. landra: A0A249RSK5; Draba incana: A0A6M8YUV9; Conringia planisiliqua: A0A6M8YN59; Arabidopsis petrogena: A0A175DLD6; Heliophila amplexicaulis: A0A6M8YX86; Heliophila africana: A0A8F2JE52; Heliophila arenaria: A0A8F2F7Z4; Heliophila collina: A0A8F2F7Z8; Heliophila cornuta: A0A8F2F836; Heliophila deserticola: A0A8F2JER0; Heliophila longifolia: A0A6M8YU25; Heliophila pusilla: A0A6M8YXQ6; Heliophila variabilis: A0A8F2F9H0; Heliophila crithmifolia: A0A8F2F896; Heliophila linearis: A0A8F2F9C9; Heliophila juncea: A0A6M8YWR9; Sinapis arvensis: A0A218KGD6; Eruca vesicaria subsp. sativa: A0A7M1CH76; Cardamine amariformis: A0A8F2F5Y7; Heliophila biseriata: A0A8F2F7S1; Shehbazia tibetica: A0A6M8ZM08; Raphanus sativus var. raphanistroides: A0A249RTP1; Heliophila diffusa: A0A8F2F8L3; Neuontobotrys berningeri: A0A6M8ZL91; Farsetia occidentalis: A0A6M8ZKI7; Conringia clavata: A0A6M8ZKE9; Cakile lanceolata subsp. fusiformis: A0A858TI75; Cakile maritima subsp. euxina: A0A858TTH4; Cakile edentula subsp. lacustris: A0A858T6W3; Cakile edentula subsp. harperi: A0A858T282; Cakile lanceolata subsp. lanceolata: A0A858TED4; Tropidocarpum gracile: A0A6M8ZHA7; Cochlearia officinalis: A0A3P3X6F0; Erysimum teretifolium: A0A6M8NHY4; Pseudofortuynia leucoclada: A0A6M8ZMW9; Heliophila elongata: A0A8F2F9E0; Cakile maritima subsp. baltica: A0A858TTG5; Noccaea vesicaria: A0A6M8Z668; Raphanus sativus var. sativus: A0A249RSP0; Conringia orientalis: A0A6M8YG79; Smelowskia flavissima: A0A6M8ZFB6; Smelowskia annua: A0A6M8ZCX8; Idahoa scapigera: A0A6M8YZ22; Cakile maritima: A0A6M8YM49; Draba oreades: A0A2S0SSF4; Cardamine occulta: A0A8F2F6E0; Sisymbrium officinale: A0A6M8ZFF1; Brassica juncea subsp. integrifolia: A0A249RTX7; Orychophragmus zhongtiaoshanus: A0A1L6UUW9; Orychophragmus longisiliquus: A0A1L6UVI4; Cochlearia sessilifolia: A0A3P3XBU9; Cochlearia scotica: A0A3P3XBC8; Cochlearia bavarica: A0A3P3X0R0; Rhizobotrya alpina: A0A6M8ZAR5; Iberis amara: A0A6M8YYS5; Cakile maritima subsp. islandica: A0A858TMV8; Hemilophia sessilifolia: A0A6M8YXV6; Cochlearia micacea: A0A3P3X5K8; Draba nemorosa: A4QL14; Kernera saxatilis: A0A6M8YZL5; Alyssum alyssoides: A0A6M8YBU1; Cochlearia tridactylites: A0A0U5ELU9; Cochlearia islandica: A0A0U5J5Z0; Teesdalia nudicaulis: A0A6M8ZIP3; Ionopsidium megalospermum: A0A3P3XEV6; Draba verna: A0A6M8YL98; Isatis tinctoria: A0A0S1MTP1; Arabis stelleri subsp. japonica: A0A1W5YPQ1; Brayopsis alpaminae: A0A6M8YLG9; Cochlearia excelsa: A0A3P3X2F0; Cochlearia macrorrhiza: A0A3P3X5J6; Arabidopsis umezawana: A0A175DNK4; Arabidopsis neglecta subsp. neglecta: A0A175DIU9; Lepidium apetalum: A0A7L9DCS2; Arabidopsis arenosa subsp. borbasii: A0A2C9C4S4; Cochlearia polonica: A0A3P3X6Z4; Cochlearia borzaeana: A0A0U5J555; Orychophragmus taibaiensis: A0A1L6UVM5; Orychophragmus hupehensis: A0A1L6UW11; Orychophragmus diffusus: A0A1L6UV53; Menonvillea spathulata: A0A6M8Z5C3; Menonvillea linearis: A0A6M8Z790; Cremolobus peruvianus: A0A6M8YPQ3; Brassica napus var. napus: A0A1B1Y159; Erysimum bicolor: A0A6M8YVW1; Farsetia stylosa: A0A220NAX0; Thlaspi arvense: A0A1U9RZL3; Scapiarabis saxicola: A0A6M8ZH63; Vella lucentina: A0A6M8ZJF4; Schouwia purpurea: A0A6M8ZGL1; Savignya parviflora: A0A6M8ZH11; Cochlearia danica: A0A3P3X1Y2; Microthlaspi perfoliatum: A0A6M8Z477; Ionopsidium abulense: A0A3P3XDL3; Cochlearia pyrenaica: A0A0U5J5R1; Alliaria petiolata: A0A6M8Y9T6; Arabidopsis kamchatica subsp. kamchatica: A0A175DB72; Heliophila lactea: A0A8F2F9Q0; Cochlearia hollandica: A0A3P3X4X3; Erysimum odoratum: A0A6M8YW82; Alyssum gmelinii: A0A221HKN4; Brassica oleracea var. gongylodes: A0A249RRP8; Cochlearia tatrae: A0A3P3XC55; Cochlearia anglica: A0A3P3X082; Cochlearia aestuaria: A0A3P3WZ26; Cakile arctica: A0A858SZF0; Cakile arabica: A0A1B1YY00; Noccaea caerulescens: A0A6M8Z5U0; Notothlaspi australe: A0A6M8Z5I1; Ionopsidium acaule: A0A0U5ELV9
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It is possible new templates exist for this target since these models were created.
Available Structures
2 Experimental Structures
Description | PDB ID | Oligo-state | Range | Ligands | ||
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Structure of C2S2M2-type Photosystem supercomplex from Arabidopsis thaliana (digitonin-extracted) |
Heteromer A0A7G2E9B1; P04778; P23321; P56777; P56778; P56779; P56780; P56782; P56790; P60129; P61839; P62095; P62100; P62109; P83755; Q07473; Q39142; Q39194; Q39195; Q9LMQ2; Q9S7M0; Q9XF89; | 12-353 | 60×CHL; 162×CLA; 30×LHG; 4×PHO; 22×BCR; 8×SQD; 12×LMG; 4×PL9; 22×AJP; 2×BCT; 2×FE2; 8×DGD; 4×CA; 2×CL; 2×HEM; 18×LUT; 10×NEX; 2×XAT; | |||
Assess | ||||||
Cryo-EM structure of the PSII supercomplex from Arabidopsis thaliana |
Heteromer P04778; P23321; P56777; P56778; P56779; P56780; P56782; P56790; P60129; P61839; P62095; P62100; P62109; P83755; Q07473; Q39194; Q9LMQ2; Q9SKI3; Q9XF89; | 16-351 | 2×FE2; 212×CLA; 4×PHO; 2×HEM; 96×CHL; | |||
Assess |
1 SWISS-MODEL model
Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
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7oui.1.H | monomer | 0.76 | 12-353 | 100.00 | ||
Assess |
Model ID | Oligo-state | Avg pLDDT | Range | Trg-Mdl Seq Id (%) |
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Model ID | Oligo-state | Avg Confidence | Range | Trg-Mdl Seq id (%) |
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