P89201 (POLG_SPMMV) Sweet potato mild mottle virus (isolate Salazar) (SPMMV)

Genome polyprotein UniProtKBInterProInteractive Modelling

3456 aa; Sequence (Fasta)

Molecule Processing
P1 proteinase
Helper component proteinase
Protein P3
6 kDa protein 1
Cytoplasmic inclusion protein
6 kDa protein 2
Viral genome-linked protein

Sequence Features

Add
 640For P1 proteinase activity
 652For P1 proteinase activity
 689For P1 proteinase activity
 1083For helper component proteinase activity
 1155For helper component proteinase activity
 2457For nuclear inclusion protein A activity
 2494For nuclear inclusion protein A activity
 2566For nuclear inclusion protein A activity
 1630-1637ATP
 743-744Cleavage; by P1 proteinase
 1196-1197Cleavage; by autolysis
 1489-1490Cleavage; by NIa-pro
 1541-1542Cleavage; by NIa-pro
 2181-2182Cleavage; by NIa-pro
 2234-2235Cleavage; by NIa-pro
 2411-2412Cleavage; by NIa-pro
 569-693Plant viral polyprotein P1, serine peptidase domain
IPR025910PF13611
 757-1196Helper component proteinase
IPR001456PF00851
 1790-1904Helicase, C-terminal
IPR001650PF00271
 1930-2192Polyprotein, Potyviridae
IPR013648PF08440
 2426-2645Potyvirus NIa protease (NIa-pro) domain
IPR001730PF00863
 2707-3088RNA-directed RNA polymerase, C-terminal domain
IPR001205PF00680
 3212-3454Potyvirus coat protein
IPR001592PF00767

Sequence Alignments

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -4.88 1sh2.1.A2715-3094
16.39
Assess