P9WGY9 | SWISS-MODEL Repository

P9WGY9 (RPOB_MYCTU) Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

DNA-directed RNA polymerase subunit beta UniProtKB InterPro STRING Interactive Modelling

1178 aa; Sequence (Fasta) ; 3 identical sequences: Mycobacterium tuberculosis: P9WGY8; Mycobacterium bovis: A1KGE7, P0A681

It is possible new templates exist for this target since these models were created.

Available Structures

71 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
Mycobacterium tuberculosis RNA polymerase holoenzyme with ECF sigma factor sigma H	5zx3 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGZ1;	23-1163	2×ZN;
Assess
M. tuberculosis RNAP elongation complex with NusG	8eot SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGZ1; P9WIU9;	30-1169	1×MG; 2×ZN;
Assess
M. tuberculosis RNAP pause escaped complex with Bacillus subtilis NusG and GMPCPP	8ej3 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGZ1; Q06795;	30-1169	1×G2P; 2×MG; 2×ZN;
Assess
M. tuberculosis RNAP elongation complex with NusG and CMPCPP	8eos SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGZ1; P9WIU9;	30-1169	1×2TM; 2×MG; 2×ZN;
Assess
Mycobacterium tuberculosis transcription initiation complex with ECF sigma factor sigma H and 6nt R…	6jcx SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGZ1;	27-1165	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis RNA polymerase transcription initiation open complex with a chimeric ECF…	6jcy SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGG7; P9WGH9; P9WGY5; P9WGY7; P9WGZ1;	23-1161	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 7 nt	6koo SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGZ1;	27-1164	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 9 nt	6kop SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGZ1;	27-1164	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 10 nt	6koq SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGZ1;	27-1164	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis RNA polymerase transcription initiation complex with ECF sigma factor si…	5zx2 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGZ1;	28-1164	2×ZN;
Assess
Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 5 nt	6kon SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGZ1;	27-1160	2×ZN; 1×MG;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L…	6dvc SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGZ1;	28-1153	2×ZN;
Assess
Mycobacterium tuberculosis RNA polymerase sigma L holoenzyme open promoter complex containing TNP-2…	7rwi SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGZ1;	28-1153	1×7US;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3 nt of…	5uh5 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	28-1153	2×ZN; 1×MG;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3nt RNA…	5uhc SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	28-1153	1×RFP; 2×ZN; 1×MG;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L…	6dvb SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGZ1;	28-1153	2×ZN;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L…	6dv9 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGZ1;	28-1153	1×MG; 2×ZN;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF selenomethioni…	6dve SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGZ1;	28-1153	2×ZN;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2ntRNA …	5uh6 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	28-1153	1×RFP; 2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis RNA polymerase sigma A holoenzyme open promoter complex containing UMN-7	7u22 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	28-1153	1×KYO; 2×ZN; 1×MG;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L…	6dvd SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGZ1;	28-1153	2×ZN;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex	5uha SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	28-1153	2×ZN; 1×MG;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-…	5uhg SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	28-1153	1×RFP; 2×ZN; 1×MG; 1×88G;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 4nt RNA…	5uhd SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	28-1153	1×RFP; 2×ZN; 1×MG;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-…	5uhe SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	28-1153	2×ZN; 1×MG; 1×88G;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 4nt RNA	5uh8 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	28-1153	2×ZN; 1×MG;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with Ri…	5uhb SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	28-1153	1×RFP; 2×ZN; 1×MG;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-…	5uhf SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	28-1153	2×ZN; 1×MG; 1×88D;
Assess
Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2nt RNA	5uh9 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	28-1153	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis transcription elongation complex with Bacillus subtilis NusG (EC_LG)	8eoe SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGZ1; Q06795;	30-1151	1×MG; 2×ZN;
Assess
Mycobacterium tuberculosis transcription elongation complex with Bacillus subtilis NusG (EC_PG)	8eof SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGZ1; Q06795;	30-1151	1×MG; 2×ZN;
Assess
Protomeric substructure from an octameric assembly of M. tuberculosis RNA polymerase in complex wit…	7zf2 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI5; P9WGY5; P9WGY7; P9WGZ1;	28-1149	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis paused transcription complex with Bacillus subtilis NusG	8ehq SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGZ1; Q06795;	30-1151	1×MG; 2×ZN;
Assess
M. tuberculosis RNAP paused complex with B. subtilis NusG and GMPCPP	8exy SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGZ1; Q06795;	30-1151	1×MG; 2×ZN; 1×G2P;
Assess
Crystal structure of MTB sigma L transcription initiation complex with 9 nt long RNA primer	6tyg SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGZ1;	28-1146
Assess
Crystal structure of MTB sigma L transcription initiation complex with 5 nt long RNA primer	6tye SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGZ1;	28-1146
Assess
Crystal structure of MTB sigma L transcription initiation complex with 6 nt long RNA primer	6tyf SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGZ1;	28-1146
Assess
Single particle cryo em structure of Mycobacterium tuberculosis RNA polymerase in complex with Fida…	6fbv SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	28-1145	2×ZN; 1×MG; 1×FI8;
Assess
Mycobacterium tuberculosis RNAP elongation complex	8e95 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGZ1;	26-1139	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis RNAP elongation complex with NusG transcription factor	8e82 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGZ1; P9WIU9;	26-1139	2×ZN; 1×MG;
Assess
Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase holoenzyme octamer comprising sigma …	7q4u SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI5; P9WGY5; P9WGY7; P9WGZ1;	29-1140	16×ZN; 8×MG;
Assess
Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase holoenzyme dimer comprising sigma fa…	7q59 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI5; P9WGY5; P9WGY7; P9WGZ1;	29-1140	4×ZN; 2×MG;
Assess
Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase core	7z8q SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGZ1;	29-1140	2×ZN; 1×MG;
Assess
Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase holoenzyme comprising sigma factor S…	7pp4 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI5; P9WGY5; P9WGY7; P9WGZ1;	29-1140	2×ZN; 1×MG;
Assess
Cryo-EM structure of Mycobacterium tuberculosis transcription initiation complex with transcription…	8hih SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O53830; P9WGI1; P9WGY5; P9WGY7; P9WGZ1;	30-1140	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis WT RNAP transcription open promoter complex with WhiB7 promoter	7kin SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis WT RNAP transcription initiation intermediate structure with Sorangicin	6vvx SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	1×SRN; 2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis RNAP S456L mutant transcription initiation intermediate structure with S…	6vvz SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	1×SRN; 2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis RNAP Holo/RbpA in relaxed state	6c05 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5;	30-1140	2×ZN; 1×MG;
Assess
Mtb RNAP Holo/RbpA/Fidaxomicin/upstream fork DNA	6bzo SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5;	30-1140	1×FI8; 2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis WT RNAP transcription closed promoter complex with WhiB7 transcription f…	7kim SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5; P9WJG3; Q6MX01;	30-1140	2×ZN; 1×MG; 1×SF4;
Assess
Mycobacterium tuberculosis RNAP promoter unwinding intermediate complex with RbpA/CarD and AP3 prom…	6ee8 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	2×ZN; 1×MG;
Assess
Mtb RNAP Holo/RbpA/double fork DNA -closed clamp	6c04 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5;	30-1140	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis WT RNAP transcription open promoter complex with WhiB7 transcription fac…	7kif SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5; P9WJG3; Q6MX01;	30-1140	2×ZN; 1×MG; 1×SF4;
Assess
Mycobacterium tuberculosis RNAP Holo/RbpA/Fidaxomicin	6c06 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5;	30-1140	2×ZN; 1×MG; 1×FI8;
Assess
Mycobacterium tuberculosis RNAP open promoter complex with RbpA/CarD and AP3 promoter	6edt SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis RNAP S456L mutant open promoter complex	6vw0 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis WT RNAP transcription open promoter complex with Sorangicin	6vvy SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	1×SRN; 2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis RNAP with RbpA/us fork and Corallopyronin	6m7j SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5;	30-1140	2×ZN; 1×MG; 1×C0L;
Assess
Mycobacterium tuberculosis RNAP promoter unwinding intermediate complex with RbpA/CarD and AP3 prom…	6eec SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	1×C0L; 2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis RNAP paused elongation complex with NusG transcription factor	8e74 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGZ1; P9WIU9;	30-1139	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis RNAP paused elongation complex with Escherichia coli NusG transcription …	8e79 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P0AFG0; P9WGY5; P9WGY7; P9WGZ1;	30-1139	2×ZN; 1×MG;
Assess
Mycobacterium tuberculosis RNAP paused elongation complex	8e8m SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGZ1;	30-1139	2×ZN; 1×MG;
Assess
Structure of the Mtb CarD/RNAP Beta subunit B1-B2 domains complex	4kbm SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WJG3;	53-432
Assess
Fe-S cluster-bound transcription activator WhiB7 in complex with the SigmaAr4-RNAP Beta flap tip ch…	7kug SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; Q6MX01;	815-829	1×SF4;
Assess
WhiB6 bound to the SigmaAr4-RNAP Beta flap tip chimera	8d5v SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WF37; P9WGI1;	815-829	1×SF4;
Assess
Complex structure of WhiB3 and the SigmaAr4-RNAP Beta flap tip chimera in space group R3	8cwr SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WF41; P9WGI1;	815-827	3×SF4; 6×SO4; 3×TRS; 9×NI;
Assess
Transcription activation subcomplex with WhiB7 bound to SigmaAr4-RNAP Beta flap tip chimera and DNA	7kuf SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; Q6MX01;	815-827	1×SF4;
Assess
Complex structure of WhiB3 and the SigmaAr4-RNAP Beta flap tip chimera in space group P43212	8cwt SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WF41; P9WGI1;	815-826	3×SF4; 25×SO4; 7×NI; 3×TRS;
Assess
WhiB3 bound to SigmaAr4-RNAP Beta flap tip chimera and DNA	8cyf SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WF41; P9WGI1;	815-826	1×SF4; 1×CAC;
Assess
Structure of Mtb RNAP Beta subunit B1 and B2 domains	4kbj SMTL PDBe PDBe-KB PDBj PDBsum RCSB	homo-2-mer	53-431
Assess

2 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
7p5x.1.C	monomer	0.87	21-1150	91.79
Assess
8hkc.1.C	monomer	0.52	869-1137	62.69
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

P9WGY9 (RPOB_MYCTU) Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

DNA-directed RNA polymerase subunit beta UniProtKBInterProSTRINGInteractive Modelling

Available Structures

71 Experimental Structures

2 SWISS-MODEL models

Alignments

Background

Resolution

DNA-directed RNA polymerase subunit beta UniProtKB InterPro STRING Interactive Modelling