Q06RF1 (PSBA_JASNU) Jasminum nudiflorum (Winter jasmine)

Photosystem II protein D1 UniProtKBInterProInteractive Modelling

353 aa; Sequence (Fasta) 727 identical sequences

Sequence Features

 118Magnesium (chlorophyll-a ChlzD1 axial ligand); via tele nitrogen.
 170Calcium-manganese-oxide [Ca-4Mn-5O]; calcium.
 170Calcium-manganese-oxide [Ca-4Mn-5O]; manganese 4.
 189Calcium-manganese-oxide [Ca-4Mn-5O]; manganese 1.
 198Magnesium (chlorophyll-a PD1 axial ligand); via tele nitrogen.
 215Iron; shared with heterodimeric partner; via tele nitrogen.
 272Iron; shared with heterodimeric partner; via tele nitrogen.
 332Calcium-manganese-oxide [Ca-4Mn-5O]; manganese 1; via tele nitrogen.
 333Calcium-manganese-oxide [Ca-4Mn-5O]; manganese 3.
 333Calcium-manganese-oxide [Ca-4Mn-5O]; manganese 4.
 342Calcium-manganese-oxide [Ca-4Mn-5O]; manganese 1.
 342Calcium-manganese-oxide [Ca-4Mn-5O]; manganese 2.
 344Calcium-manganese-oxide [Ca-4Mn-5O]; calcium; via carboxylate.
 344Calcium-manganese-oxide [Ca-4Mn-5O]; manganese 2; via carboxylate.
 161Tyrosine radical intermediate.
 190Stabilizes free radical intermediate.
 29-46Helical.
 118-133Helical.
 142-156Helical.
 197-218Helical.
 274-288Helical.
 344-345Cleavage; by CTPA.
 28-327Photosynthetic reaction centre, L/M
IPR000484PF00124

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Cryo-EM structure of spinach PSII-LHCII supercomplex at 3.2 Angstrom resolution Heteromer
A0A0K9QLX6; A0A0K9QUQ7; A0A0K9RHP1; P04160; P05146; P06003; P06005; P12163; P12301; P12302; P12333; P12359; P60128; P60150; P61840; P62103; P62112; P69383; P69560; Q41387; Q9M3L2; Q9M3M6;
18×LHG;OEX;PHO; 10×NEX;DGD;CL;XAT; 50×CHL; 156×CLA;PL9;FE2; 18×LUT;BCT;HEM; 10×LMG; 20×BCR;SQD;3jcu11-344