Q07955 | SWISS-MODEL Repository

Q07955 (SRSF1_HUMAN) Homo sapiens (Human)

Serine/arginine-rich splicing factor 1 UniProtKB InterPro STRING Interactive Modelling

248 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3); 78 identical sequences

It is possible new templates exist for this target since these models were created.

Available Structures

9 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
Transportin 3 in complex with phosphorylated ASF/SF2	4c0o SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer Q9Y5L0;	116-211
Assess
Crystal structure of SR protein kinase 1 complexed to its substrate ASF/SF2	3beg SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer Q96SB4;	121-210	1×SEP; 1×ALA; 1×ANP;
Assess
Human pre-Bact-1 spliceosome	7abg SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O14776; O43660; O75533; O75643; O95777; P08579; P09661; P14678; P41223; P52298; P55081; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; Q09161; Q12874; Q13435; Q13573; Q15029; Q15393; Q15427; Q15428; Q15459; Q6P2Q9; Q7RTV0; Q8IYB3; Q8NAV1; Q8TAD8; Q96DI7; Q96NC0; Q99459; Q9BWJ5; Q9BZL1; Q9NW64; Q9P013; Q9UK45; Q9Y2W2; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	122-195	1×IHP; 1×GTP; 1×MG; 1×GTG;
Assess
Structure of human SF2/ASF RNA recognition motif 2 (RRM2)	2o3d SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	107-215
Assess
Solution structure of RRM domain in splicing factor SF2	1x4a SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-96
Assess
Solution structure of RRM domain in splicing factor 2	1x4c SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	113-207
Assess
Structure of SRSF1 RRM2 in complex with the RNA 5'-UGAAGGAC-3	2m8d SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	107-196
Assess
NMR structure of RNA recognition motif 2 (RRM2) of Homo sapiens splicing factor, arginine/serine-ri…	2m7s SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	106-195
Assess
Structure of human SRSF1 RRM1 bound to AACAAA RNA	6hpj SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	6-89
Assess

3 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
7pu5.1.B	monomer	0.60	12-180		31.16
Assess
6xlw.1.A	monomer	0.56	9-184		18.50
Assess
6tr0.1.A	monomer	0.51	10-184		19.19
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

6 SWISS-MODEL models built on isoform sequence

Template	Isoform	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	7pu5.1.B	monomer	0.60	12-191		29.53
Assess
Isoform 2	6xlx.1.A	monomer	0.56	12-192		17.58
Assess
Isoform 2	6tr0.1.A	monomer	0.51	10-193		18.23
Assess
Isoform 3	7pu5.1.A	monomer	0.61	11-189		29.73
Assess
Isoform 3	6xlw.1.A	monomer	0.56	9-189		18.44
Assess
Isoform 3	6tr0.1.A	monomer	0.52	10-189		19.21
Assess

Alignments