Q12460 (NOP56_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Nucleolar protein 56 UniProtKBInterProSTRINGInteractive Modelling

504 aa; Sequence (Fasta) ; 7 identical sequences: Saccharomyces cerevisiae: N1P1B4, C7GIS9, B5VNB7, A0A8H4BZG5, A7A187; Saccharomyces boulardii: A0A0L8VKV8; Saccharomyces cerevisiae x Saccharomyces kudriavzevii: H0GKD0

Available Structures

9 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state A (Poly-Ala)
6zqa
 Heteromer
O13516; P05756; P06367; P0C0W1; P0CX29; P0CX51; P0CX55; P15646; P25368; P25586; P25635; P26783; P26786; P32899; P33442; P33750; P34247; P35997; P36144; P38333; P38882; P39990; P40055; P40362; P40470; P40546; P42945; P47083; P53254; P53276; P53941; Q02354; Q02931; Q04177; Q04305; Q04500; Q05498; Q05946; Q06078; Q06287; Q06506; Q06512; Q06679; Q08096; Q08492; Q08965; Q12035; Q12136; Q12220; Q12499; Q3E7X9; Q99207; Q99216; 		3-415
2×ZN; 2×MG; 1×GTP;
Assess
Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-A (Poly-Ala)
6zqe
 Heteromer
O13516; P05756; P06367; P07280; P0C0W1; P0CX29; P0CX31; P0CX35; P0CX37; P0CX39; P0CX47; P0CX51; P0CX55; P15646; P25368; P25635; P26783; P26786; P32899; P33442; P34247; P35194; P35997; P38333; P38882; P39990; P40362; P41819; P42945; P47083; P53254; P53276; P53941; Q02931; Q04177; Q04217; Q04305; Q04500; Q05498; Q05946; Q06078; Q06287; Q06506; Q06512; Q06679; Q08096; Q08492; Q08965; Q12035; Q12136; Q12220; Q12499; Q3E7X9; Q99207; Q99216; 		3-415
2×ZN;
Assess
Cryo-EM structure of 90S small subunit preribosomes in transition states (State E)
6lqt
 Heteromer
O13516; P05756; P06367; P0CX29; P0CX31; P0CX35; P0CX37; P0CX39; P0CX47; P0CX51; P15646; P25368; P25635; P26783; P26786; P32899; P33442; P33750; P34247; P35194; P35997; P38882; P39990; P40055; P40362; P42945; P47083; P53254; P53941; Q02354; Q02931; Q04177; Q04305; Q04500; Q05022; Q05498; Q05946; Q06078; Q06287; Q06506; Q06679; Q08096; Q08965; Q12035; Q12136; Q12220; Q12499; Q3E7X9; Q3E7Y3; Q99207; 		3-415
2×ZN; 1×GTP; 1×MG;
Assess
Cryo-EM structure of 90S small subunit preribosomes in transition states (State C1)
6lqv
 Heteromer
O13516; P0CX29; P0CX31; P0CX35; P0CX37; P0CX39; P0CX47; P0CX51; P15646; P25635; P26783; P32899; P33750; P34247; P35194; P38333; P38882; P39990; P40055; P40079; P40362; P42945; P47083; P48234; P53276; P53914; P53941; Q02354; Q02931; Q04177; Q04305; Q04500; Q05498; Q05946; Q06078; Q06287; Q06506; Q06512; Q06631; Q06679; Q08096; Q08492; Q08965; Q12035; Q12136; Q12220; Q12499; Q3E7X9; Q99207; 		3-415
1×ZN; 1×GTP; 1×MG;
Assess
Conformational switches control early maturation of the eukaryotic small ribosomal subunit
6nd4
 Heteromer
P15646; P25635; P32899; P33750; P38882; P39990; P40055; P40362; P42945; P47083; P53276; Q02354; Q02931; Q04177; Q04305; Q05498; Q05946; Q06078; Q06506; Q06679; Q08492; Q12220; Q12499; 		3-415
Assess
Cryo-EM structure of 90S preribosome with inactive Utp24 (state A2)
7d5s
 Heteromer
O13516; P05756; P06367; P0CX29; P0CX51; P0CX55; P15646; P25368; P25586; P25635; P26783; P32899; P33750; P34247; P36144; P38333; P38882; P39990; P40055; P40362; P40470; P42945; P47083; P48589; P53254; P53276; P53941; Q02354; Q02931; Q04177; Q04305; Q04500; Q05022; Q05498; Q05946; Q06078; Q06287; Q06506; Q06512; Q06679; Q08096; Q08492; Q08965; Q12035; Q12136; Q12220; Q12499; Q3E7X9; Q99207; 		3-415
1×ZN; 1×GTP; 1×MG;
Assess
Cryo-EM structure of 90S preribosome with inactive Utp24 (state F1)
7d5t
 Heteromer
O13516; P05756; P06367; P0CX29; P0CX31; P0CX35; P0CX37; P0CX39; P0CX47; P0CX51; P15646; P25368; P25635; P26783; P26786; P32899; P33442; P33750; P34247; P35194; P35997; P39990; P40055; P40362; P42945; P47083; P53254; P53941; Q02354; Q02931; Q04177; Q04217; Q04500; Q05022; Q05498; Q05946; Q06078; Q06506; Q08096; Q08965; Q12035; Q12136; Q12220; Q12499; Q3E7X9; Q3E7Y3; Q99207; 		3-415
2×ZN; 1×GTP; 1×MG; 1×ADP;
Assess
Cryo-EM structure of the 90S small subunit pre-ribosome (Mtr4-depleted, Enp1-TAP)
5wyk
 Heteromer
O13516; P05756; P06367; P0C0W1; P0CX29; P0CX31; P0CX33; P0CX35; P0CX39; P0CX47; P0CX51; P15646; P25368; P25586; P25635; P26783; P26786; P32899; P33442; P35997; P36144; P39990; P40362; P42945; P47083; P53254; P53941; Q05498; Q05946; Q06078; Q06287; Q06506; Q08096; Q08965; Q12220; Q12499; Q3E7X9; Q99216; 		8-417
Assess
Crystal structure of eukaryotic Fibrillarin with Nop56 N-terminal domain
6zdt
 Heteromer
P15646; 		1-165
Assess

7 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
6zqc.30.Amonomer0.773-415
100.00
Assess
7xpl.1.Amonomer0.665-418
32.17
Assess
5jpq.1.Tmonomer0.655-417
32.43
Assess
3nmu.3.Amonomer0.6448-417
31.03
Assess
3id5.1.Amonomer0.634-419
32.17
Assess
4by9.1.Imonomer0.6146-417
30.86
Assess
4by9.1.Fmonomer0.6046-417
30.86
Assess