Q15858 (SCN9A_HUMAN) Homo sapiens (Human)

Sodium channel protein type 9 subunit alpha UniProtKBInterProSTRINGInteractive Modelling

1988 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4)

Available Structures

39 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Cryo-EM structure of human Nav1.7(E406K)-beta1-beta2 complex
7w9l
 Heteromer
O60939; Q07699; 		8-1891
3×NAG; 5×NAG; 3×P5S; 6×Y01; 1×9Z9; 14×LPE; 5×PCW;
Assess
Cryo-EM structure of human Nav1.7(E406K) in complex with auxiliary beta subunits, huwentoxin-IV and…
7w9t
 Heteromer
O60939; Q07699; 		8-1891
3×NAG; 1×9SL; 5×NAG; 2×P5S; 5×Y01; 1×9Z9; 14×LPE; 5×PCW;
Assess
Cryo-EM structure of human Nav1.7-beta1-beta2 complex at 2.2 angstrom resolution
7w9k
 Heteromer
O60939; Q07699; 		8-1891
3×NAG; 5×NAG; 3×P5S; 6×Y01; 1×9Z9; 1×NA; 15×LPE; 1×1PW; 5×PCW;
Assess
Cryo-EM structure of human Nav1.7(E406K) in complex with auxiliary beta subunits, ProTx-II and tetr…
7w9m
 Heteromer
O60939; Q07699; 		8-1891
2×NAG; 1×9SR; 6×NAG; 1×P5S; 5×Y01; 1×LPE;
Assess
Cryo-EM structure of human Nav1.7(E406K) in complex with auxiliary beta subunits, huwentoxin-IV and…
7w9p
 Heteromer
O60939; Q07699; 		8-1891
3×NAG; 1×9SL; 5×NAG; 3×P5S; 6×Y01; 13×LPE; 1×1PW; 5×PCW;
Assess
Cryo-EM structure of human NaV1.7/beta1/beta2-XEN907
7xm9
 Heteromer
O60939; Q07699; 		7-1769
2×NAG; 5×NAG; 1×G2E; 1×6OU;
Assess
Cryo-EM structure of Nav1.7 with LTG
8thh
 Heteromer
O60939; Q07699; 		8-1768
3×NAG; 5×NAG; 2×IYJ; 4×Y01; 6×LPE; 3×PCW; 1×P5S;
Assess
Structure of human Nav1.7 in complex with PF-05089771
8i5g
 Heteromer
O60939; Q07699; 		8-1768
3×NAG; 5×NAG; 2×Y01; 1×9Z9; 1×T70; 1×NA; 8×LPE; 5×PCW;
Assess
Structure of human Nav1.7 in complex with vixotrigine
8i5y
 Heteromer
O60939; Q07699; 		8-1768
3×NAG; 5×NAG; 1×P5S; 4×Y01; 1×9Z9; 1×TB4; 1×NA; 14×LPE; 1×1PW; 5×PCW;
Assess
Structure of human Nav1.7 in complex with bupivacaine
8i5b
 Heteromer
O60939; Q07699; 		8-1768
2×NAG; 7×NAG; 1×P5S; 6×Y01; 6×LPE; 5×PCW; 1×OJ0;
Assess
Human Nav1.7 mutant class-I
7xve
 Heteromer
O60939; Q07699; 		8-1768
2×NAG; 7×NAG; 1×Y01; 4×CLR; 18×LPE; 1×1PW; 6×PCW; 1×P5S;
Assess
Nav1.7 mutant class2
7xvf
 Heteromer
O60939; Q07699; 		8-1768
2×NAG; 7×NAG; 5×Y01; 1×CLR; 17×LPE; 1×1PW; 6×PCW; 1×P5S;
Assess
Structure of human Nav1.7 in complex with Vinpocetine
8i5x
 Heteromer
O60939; Q07699; 		8-1768
3×NAG; 5×NAG; 1×P5S; 5×Y01; 1×9Z9; 1×T7F; 11×LPE; 5×PCW;
Assess
Cryo-EM structure of Nav1.7 with LCM
8s9b
 Heteromer
O60939; Q07699; 		8-1768
3×NAG; 4×NAG; 2×LQO; 2×P5S; 4×Y01; 8×LPE; 3×PCW;
Assess
Cryo-EM structure of Nav1.7 with RLZ
8thg
 Heteromer
O60939; Q07699; 		8-1768
3×NAG; 5×NAG; 1×657; 3×Y01; 6×LPE; 1×PCW; 1×P5S;
Assess
Structure of human Nav1.7 in complex with Hardwickii acid
8j4f
 Heteromer
Q07699; 		8-1768
3×NAG; 5×NAG; 1×UK0; 3×Y01; 1×9Z9; 10×LPE; 4×PCW;
Assess
Cryo-EM structure of Nav1.7 with CBZ
8s9c
 Heteromer
O60939; Q07699; 		8-1768
3×NAG; 5×NAG; 1×N6W; 3×P5S; 5×Y01; 9×LPE; 4×PCW;
Assess
Voltage-gated sodium channel Nav1.7 variant M2
8xmn
 Heteromer
O60939; Q07699; 		8-1768
2×NAG; 6×NAG; 5×LPE; 3×PCW;
Assess
Voltage-gated sodium channel Nav1.7 variant M4
8xmo
 Heteromer
O60939; Q07699; 		8-1768
2×NAG; 6×NAG; 7×LPE; 5×PCW;
Assess
Cryo-EM structure of Nav1.7 with CBD
8g1a
 Heteromer
O60939; Q07699; 		11-1766
2×NAG; 6×NAG; 2×P0T; 2×P5S; 5×Y01; 1×9Z9; 13×LPE; 4×PCW;
Assess
Structure of human voltage-gated sodium channel Nav1.7 in complex with auxiliary beta subunits, Pro…
6j8i
 Heteromer
O60939; Q07699; 		114-1768
2×NAG; 7×NAG; 1×9SR;
Assess
Structure of human voltage-gated sodium channel Nav1.7 in complex with auxiliary beta subunits, Pro…
6j8j
 Heteromer
O60939; Q07699; 		114-1768
2×NAG; 7×NAG; 1×9SR;
Assess
Cryo-EM structure of human NaV1.7/beta1/beta2-Nav1.7-IN2
7xmf
 Heteromer
O60939; Q07699; 		114-1768
2×NAG; 6×NAG; 1×G2W;
Assess
Cryo-EM structure of human NaV1.7/beta1/beta2-TCN-1752
7xmg
 Heteromer
O60939; Q07699; 		114-1768
2×NAG; 5×NAG; 1×G4I;
Assess
Structure of human voltage-gated sodium channel Nav1.7 in complex with auxiliary beta subunits, huw…
6j8g
 Heteromer
O60939; Q07699; 		114-1768
2×NAG; 7×NAG; 1×9SL;
Assess
Structure of human voltage-gated sodium channel Nav1.7 in complex with auxiliary beta subunits, huw…
6j8h
 Heteromer
O60939; Q07699; 		114-1768
2×NAG; 7×NAG; 1×9SL;
Assess
Voltage-gated sodium channel Nav1.7 variant M9
8xmm
 Heteromer
Q07699; 		114-1768
2×NAG; 6×NAG; 1×CLR; 9×LPE; 1×1PW; 6×PCW; 1×P5S;
Assess
Structure of VSD4-NaV1.7-NaVPas channel chimera bound to the hybrid inhibitor GNE-9296
8f0s
 Heteromer
D0E0C2; P49126; 		257-1631
1×NAG; 1×NAG; 4×NAG; 1×X80; 1×PEE; 1×Y01;
Assess
Cryo-EM structure of a human-cockroach hybrid Nav channel bound to alpha-scorpion toxin AaH2.
6nt4
 Heteromer
D0E0C2; P01484; 		257-1631
1×NAG; 5×NAG; 5×76F; 1×AJP; 1×LHG; 1×Y01;
Assess
Structure of NavAb/Nav1.7-VS2A chimera trapped in the resting state by tarantula toxin m3-Huwentoxi…
7k48
 Heteromer
A8EVM5; P83303; 		751-841
Assess
CryoEM structure of Nav1.7 VSD2 (actived state) in complex with the gating modifier toxin ProTx2
6n4q
 Heteromer
A8EVM5; P83476; 		758-843
Assess
CryoEM structure of Nav1.7 VSD2 (deactived state) in complex with the gating modifier toxin ProTx2
6n4r
 Heteromer
A8EVM5; P83476; 		758-843
Assess
NaChBac-Nav1.7VSDII chimera and HWTX-IV complex
6w6o
 Heteromer
P83303; Q9KCR8; 		817-835
12×POV;
Assess
Human Nav1.7-VSD4-NavAb in complex with GX-936.
5ek0
homo-4-mer1529-1624
21×PX4; 4×5P2;
Assess
NaChBac-Nav1.7VSDII chimera in nanodisc
6vxo
homo-4-mer817-835
12×POV;
Assess
Cryo-EM structure of a human-cockroach hybrid Nav channel.
6nt3
monomer257-1631
1×NAG; 2×NAG; 4×NAG; 1×Y01; 4×76F; 1×LHG; 1×AJP;
Assess
Structure of VSD4-NaV1.7-NaVPas channel chimera bound to the arylsulfonamide inhibitor GNE-3565
8f0r
monomer257-1631
1×NAG; 5×NAG; 1×X7W; 2×PEE; 1×Y01;
Assess
Structure of VSD4-NaV1.7-NaVPas channel chimera bound to the hybrid inhibitor GNE-1305
8f0p
monomer257-1631
1×NAG; 3×NAG; 5×PEE; 1×Y01; 1×X7L;
Assess
Structure of VSD4-NaV1.7-NaVPas channel chimera bound to the acylsulfonamide inhibitor GDC-0310
8f0q
monomer257-1631
1×NAG; 1×BMA; 2×NAG; 1×X7R; 5×PEE; 1×Y01;
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
7w9k.1.Amonomer0.648-1891
2×P5S; 3×Y01; 1×9Z9; 10×LPE; 1×1PW; 4×PCW;100.00
Assess

3 SWISS-MODEL models built on isoform sequence

TemplateIsoformOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 27w9k.1.Amonomer0.648-1891
2×P5S; 3×Y01; 1×9Z9; 10×LPE; 1×1PW; 4×PCW;99.90
Assess
Isoform 37w9k.1.Amonomer0.658-1880
3×P5S; 4×Y01; 1×9Z9; 11×LPE; 1×1PW; 4×PCW;99.90
Assess
Isoform 47w9k.1.Amonomer0.658-1880
3×P5S; 4×Y01; 1×9Z9; 11×LPE; 1×1PW; 4×PCW;99.80
Assess