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Q5R4V7 (UB2D3_PONAB) Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)

Ubiquitin-conjugating enzyme E2 D3 UniProtKBAFDB90v4InterProSTRINGInteractive Modelling

147 aa; Sequence (Fasta) ; 130 identical sequences

Available Structures

40 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Complex of human TRIM2 RING domain, UBCH5C, and Ubiquitin Heteromer
P0CG48; P61077; Q9C040;
1-147
GOL;ZN;PE8;
Assess
SdcA in complex with the E2, UbcH5C Heteromer
P61077; Q6RCR3;
1-147
Assess
Crystal structure of the U-BOX domain of human E4B ubiquitin ligase in complex with UBCH5C E2 ubiqu… Heteromer
O95155; P61077;
1-147
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P0CG47; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P0CG47; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P0CG47; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P0CG47; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c with back… Heteromer
P04908; P06899; P0CG47; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c with back… Heteromer
P04908; P06899; P0CG47; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c (UbcH5c c… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P0CG47; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P0CG47; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
1-147
ZN;
Assess
Cryo-EM structure of BRCA1/BARD1 bound to H2AK127-UbcH5c-Ub nucleosome Heteromer
O60814; P04908; P38398; P61077; P62805; Q71DI3; Q99728;
1-147
ZN;
Assess
PCGF5-RING1B-UbcH5c complex Heteromer
P61077; Q86SE9; Q99496;
2-147
ZN;
Assess
Structure of the stable UBE2D3-UbDha conjugate Heteromer
P0CG47; P61077;
2-147
GOL;
Assess
UbcH5c~Ubiquitin Conjugate Heteromer
P0CG48; P61077;
2-147
GOL;
Assess
RCR E3 ligase E2-Ubiquitin transthiolation intermediate Heteromer
O75592; P0CG48; P61077;
2-147
ZN;LWZ;
Assess
Bmi1/Ring1b-UbcH5c complex structure Heteromer
P35226; P61077; Q99496;
2-147
ZN;
Assess
Structure of Shigella effector OspG in complex with host UbcH5c- Ubiquitin conjugate Heteromer
P0CG48; P61077; Q99PZ6;
2-147
Assess
Crystal structure of the Ring1B/Bmi1/UbcH5c PRC1 ubiquitylation module bound to the nucleosome core… Heteromer
P02281; P06897; P35226; P61077; P62799; P84233; Q99496;
2-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle in complex with BRCA1-BARD1-UbcH5c Heteromer
P04908; P06899; P38398; P61077; P62805; P68431; Q99728;
2-147
ZN;
Assess
Cryo-EM structure of the BRCA1-UbcH5c/BARD1 E3-E2 module bound to a nucleosome Heteromer
O60814; P38398; P61077; P62805; Q6FI13; Q71DI3; Q99728;
2-147
ZN;
Assess
Solution Structure of the UbcH5c/Ub Non-covalent Complex Heteromer
P0CG48; P61077;
2-147
Assess
Cryo-EM structure of the human nucleosome core particle in complex with RNF168-UbcH5c Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
2-147
ZN;
Assess
Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A lysine 15 in c… Heteromer
P04908; P06899; P61077; P62805; P68431; Q8IYW5;
2-147
ZN;
Assess
Crystal structure of human ubiquitin-conjugating enzyme UBCH5Cmonomer1-147
Assess
Crystal structure of ubch5cmonomer1-147
Assess
Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 12-residue linkermonomer2-147
NA;ZN;CL;
Assess
Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 4-residue linkermonomer2-147
17×CL;GOL;ZN;NA;
Assess
Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 2-residue linkermonomer2-147
CL;GOL;ZN;NA;
Assess
Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 20-residue linker (crystallization…monomer2-147
ZN;CL;
Assess
Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 20-residue linker (crystallization…monomer2-147
ZN;
Assess
Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 26-residue linker (RING not modele…monomer2-147
Assess
Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 20-residue linker (condition 2. RI…monomer2-147
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
6w7z.1.Amonomer0.891-147
94.56
Assess