Q6R325 (POLG_AEVVR) Avian encephalomyelitis virus (strain Van Reokel) (AEV)

Genome polyprotein UniProtKBInterProInteractive Modelling

2134 aa; Sequence (Fasta)

Molecule Processing
Protein VP0
Protein VP4
Protein VP2
Protein VP3
Protein VP1
Protein 2A
Protein 2B
Protein 2C
Protein 3A
Protein 3B
Protease 3C
RNA-directed RNA polymerase 3D-POL

Sequence Features

Add
 791
 802
 863Acyl-thioester intermediate
 1477For protease 3C activity
 1515For protease 3C activity
 1603For protease 3C activity
 1378-1392
 1153-1160ATP
 19-20Cleavage
 242-243Cleavage; by protease 3C
 487-488Cleavage; by protease 3C
 757-758Cleavage; by host
 806-807Cleavage; by protease 3C
 1021-1022Cleavage; by protease 3C
 1347-1348Cleavage; by protease 3C
 1412-1413Cleavage; by protease 3C
 1433-1434Cleavage; by protease 3C
 1648-1649Cleavage; by protease 3C
 46-211Picornavirus capsid
IPR001676PF00073
 340-434Picornavirus capsid
IPR001676PF00073
 529-691Hepatitis A virus, protein VP1-2A
IPR024354PF12944
 775-874LRAT domain
IPR007053PF04970
 1149-1252Helicase, superfamily 3, single-stranded DNA/RNA virus
IPR000605PF00910
 1439-1625Peptidase C3A/C3B, picornaviral
IPR000199PF00548
 1696-2093RNA-directed RNA polymerase, C-terminal domain
IPR001205PF00680

Sequence Alignments

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -4.83 2ijd.2.A1434-2125
27.39
Assess