Q72KA1 (SSRP_THET2) Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27)
SsrA-binding protein UniProtKBInterProInteractive Modelling
144 aa; Sequence (Fasta) ;
3 identical sequences: Thermus parvatiensis: A0A0X8D8B9; Thermus thermophilus: Q8RR57, A0A7R7TDH6
It is possible new templates exist for this target since these models were created.
Available Structures
8 Experimental Structures
Description | PDB ID | Oligo-state | Range | Ligands | ||
---|---|---|---|---|---|---|
Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome |
Heteromer P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN6; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP7; Q5SLP8; Q5SLQ0; Q8RR57; Q9Z9H5; | 3×ZN; 2×MG; 1×KIR; 1×GDP; | ||||
Assess | ||||||
Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosome |
Heteromer P0DOY6; P0DOY7; P0DOY8; P0DOY9; P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP7; Q5SLP8; Q5SLQ0; Q5SLQ1; Q8RR57; Q9Z9H5; | 637×MG; 3×ZN; | ||||
Assess | ||||||
tmRNA-SmpB: a journey to the center of the bacterial ribosome | monomer | |||||
Assess | ||||||
Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus | monomer | |||||
Assess | ||||||
Crystal structure of the tRNA domain of tmRNA from Thermus thermophilus HB8 | monomer | |||||
Assess | ||||||
Modified E. coli tmRNA in the resume state with the tRNA-like domain in the ribosomal P site intera… | monomer | |||||
Assess | ||||||
tmRNA-SmpB: a journey to the center of the bacterial ribosome | monomer | |||||
Assess | ||||||
Crystal sturucture of TT0801 from Thermus thermophilus | monomer | 1×K; | ||||
Assess |
2 SWISS-MODEL models
Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
---|---|---|---|---|---|---|
4v8q.1.7 | monomer | 0.71 | 100.00 | |||
Assess | ||||||
3iyr.1.B | monomer | 0.62 | 100.00 | |||
Assess |