Q86YL7 (PDPN_HUMAN) Homo sapiens (Human)

Podoplanin UniProtKBInterProInteractive Modelling

162 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; )

Sequence Features

 105A -> G (in dbSNP:rs2486188). VAR_028015 dbSNP
 147A -> G (in dbSNP:rs2486188). VAR_028016 dbSNP
 132-152Helical.
 150-151Cleavage; by gamma-secretase.

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Crystal structure of monoclonal anti-human podoplanin antibody NZ-1 with bound PA peptide Heteromer
EDO;4yo041-51
Crystal structure of NZ-1 Fv-clasp fragment with its antigen peptide Heteromer
CA;5xcv40-50
Crystal structure of CLEC-2 in complex with O-glycosylated podoplanin Heteromer
Q9P126;
SIA;GAL;A2G;3wsr46-54

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
homo-2-mer -4.792k1l.1.B124-154
32.26

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
6monomer-1.902k1k.1.B82-112
32.26
5monomer-2.742k1l.1.A82-112
32.26
2homo-2-mer-3.052k1k.1.B23-52
33.33
3homo-2-mer-4.742k1l.1.B200-230
32.26
4homo-2-mer-4.742k1l.1.B200-230
32.26