Q8NB78 (KDM1B_HUMAN) Homo sapiens (Human)
Lysine-specific histone demethylase 2 UniProtKBInterProInteractive Modelling
It is possible new templates exist for this target since these models were created.
Available Structures
15 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Ligands | ||
|---|---|---|---|---|---|---|
| Complex structure of LSD2/AOF1/KDM1b with H3K4 mimic |
Heteromer P68431; | 3×ZN; 1×FAD; | ||||
| Assess | ||||||
| Crystal structure of LSD2-NPAC with H3(1-26)in space group P21 |
Heteromer Q49A26; Q92133; | 1×FAD; 3×ZN; | ||||
| Assess | ||||||
| Crystal structure of LSD2-NPAC with H3 in space group P3221 |
Heteromer P84243; Q49A26; | 1×FAD; 6×IOD; 2×GOL; 3×ZN; | ||||
| Assess | ||||||
| Crystal structure of LSD2-NPAC with H3 in space group P21 |
Heteromer P84243; Q49A26; | 1×FAD; 1×GOL; 3×ZN; | ||||
| Assess | ||||||
| Crystal structure of LSD2 with H3 |
Heteromer P84243; | 2×FAD; 6×ZN; | ||||
| Assess | ||||||
| Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 2 |
Heteromer P02281; P06897; P62799; P84233; Q49A26; | 1×FAD; 3×ZN; | ||||
| Assess | ||||||
| Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 3 |
Heteromer P02281; P06897; P62799; P84233; Q49A26; | 1×FAD; 3×ZN; | ||||
| Assess | ||||||
| Crystal structure of LSD2-NPAC |
Heteromer Q49A26; | 1×FAD; 2×GOL; 3×ZN; 1×PGE; | ||||
| Assess | ||||||
| Crystal structure of LSD2-NPAC with tranylcypromine |
Heteromer Q49A26; | 1×FA9; 3×ZN; | ||||
| Assess | ||||||
| Crystal structure of LSD2 in complex with cis-4-Br-2,5-F2-PCPA (S1024) | monomer | 3×ZN; 1×FAD; 1×8A2; 1×FLC; 1×PG4; 1×EDO; | ||||
| Assess | ||||||
| Crystal structure of LSD2 in complex with trans-4-Br-PCPA | monomer | 3×ZN; 2×FAD; 2×DIJ; 1×FLC; 1×PGE; 4×GOL; | ||||
| Assess | ||||||
| Crystal structure of LSD2 in complex with cis-4-Br-PCPA | monomer | 3×ZN; 1×FAD; 1×DIJ; 1×FLC; 1×PGE; 9×GOL; | ||||
| Assess | ||||||
| Native structure of LSD2/AOF1/KDM1b in spacegroup of I222 at 2.9A | monomer | 3×ZN; 1×FAD; 1×K; | ||||
| Assess | ||||||
| Native structure of LSD2 /AOF1/KDM1b in spacegroup of C2221 at 2.13A | monomer | 3×ZN; 1×FAD; 1×FLC; | ||||
| Assess | ||||||
| Crystal structure of LSD2 | monomer | 1×FAD; 2×CL; 1×NA; 3×ZN; | ||||
| Assess | ||||||
2 SWISS-MODEL models
| Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 7xe1.1.A | monomer | 0.90 | 3×ZN; 1×FAD; 1×FLC; | 100.00 | ||
| Assess | ||||||
| 5lhi.1.A | monomer | 0.68 | 35.98 | |||
| Assess | ||||||
2 SWISS-MODEL models built on isoform sequence
| Template | Isoform | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) |
|---|---|---|---|---|---|---|
| Isoform 2 | 7xe1.1.A | monomer | 0.86 | 3×ZN; 1×FAD; | 99.10 | |
| Assess | ||||||
| Isoform 4 | 7xe1.1.A | monomer | 0.93 | 100.00 | ||
| Assess | ||||||