Q8RQE9 (RPOB_THET8) Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)

DNA-directed RNA polymerase subunit beta UniProtKBInterProSTRINGInteractive Modelling

1119 aa; Sequence (Fasta)

Sequence Features

 18-379RNA polymerase, beta subunit, protrusion
IPR007644PF04563
 142-334RNA polymerase Rpb2, domain 2
IPR007642PF04561
 393-461RNA polymerase Rpb2, domain 3
IPR007645PF04565
 471-535DNA-directed RNA polymerase, beta subunit, external 1 domain
IPR019462PF10385
 597-1026DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
IPR007120PF00562
 1028-1102RNA polymerase Rpb2, domain 7
IPR007641PF04560

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
'Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with inhibitor tag... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
MG;ZN;TGT;2be51-1119
'Crystal structure of the T. thermophilus RNA polymerase holoenzyme in complex with antibiotic st... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
STD;ZN;MG;2a6h1-1119
'Crystal structure of the T. thermophilus RNA polymerase holoenzyme in complex with antibiotic ri... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
313×MG;RBT;ZN;2a681-1119
'Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with antibiotic ri... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
ZN; 266×MG;RPT;2a691-1119
Crystal structure of the T. thermophilus RNA polymerase elongation complex Heteromer
Q5SHR6; Q8RQE7; Q8RQE8;
ZN;MG;2o5i1-1119
Crystal structure of the RNA polymerase holoenzyme from Thermus thermophilus at 2.6A resolution Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
PB; 260×MG;1iw71-1119
Structural basis for transcription regulation by alarmone ppGpp Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
359×MG;ZN;1smy1-1119
'Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with antibiotic my... Heteromer
Q5SKW1; Q8RQE7; Q8RQE8; Q9Z9H6;
ZN;MG;MXP;3eql1-1119
Re-refinement of Thermus thermopiles DNA-directed RNA polymerase structure Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
ZN;G4P;PO4;MG;5tmc1-1119
Crystal structure of the T. Thermophilus RNA polymerase holoenzyme Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
ZN;MG;2a6e1-1119
'Structure of Thermus thermophilus RNA polymerase holoenzyme in complex with the antibiotic strep... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
STD;ZN;MG;1zyr1-1119
Crystal structure of the T. thermophilus RNAP polymerase elongation complex with the ntp substrat... Heteromer
Q5SHR6; Q8RQE7; Q8RQE8;
STD;APC;ZN;MG;2ppb1-1119
Re-refinement of thermus thermophilus RNA polymerase Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
NE6;MG;PO4;ZN;5tmf1-1119
'Crystal structure of the T. thermophilus RNAP polymerase elongation complex with the NTP substra... Heteromer
Q5SHR6; Q8RQE7; Q8RQE8;
APC;ZN;MG;2o5j1-1119
'Crystal structure of thermus thermophilus rna polymerase holoenzyme in complex with the antibiot... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
ZN;MPD;PO4;NE6;MG;3dxj1-1119
Crystal structure of Thermus thermophilus RNA polymerase holoenzyme at 3.3 angstroms resolution Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
ZN;MG;2cw01-1119
Crystal structure of Thermus thermophilus RNA polymerase holoenzyme in complex with GE23077 Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
ZN;MB8;MG;4mq91-1119
Thermus thermophilus RNA polymerase backtracked complex Heteromer
Q5SHR6; Q8RQE7; Q8RQE8;
ZN;4wqs1-1119
'X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter varian... Heteromer
Q5SHR6; Q72L95; Q8RQE7; Q8RQE8;
MG;ZN;POP;6ow31-1118
X-ray crystal structure of bacterial RNA polymerase and pyrG promoter complex Heteromer
Q5SKW1; Q72I32; Q8RQE7; Q8RQE8;
ZN;MG;5voi1-1118
Crystal structure of Thermus thermophilus transcription initiation complex soaked with GE23077 Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
MG;MB8;ZN;4oin1-1118
'X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter varian... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
MG;ZN;POP;6ovr1-1118
Thermus thermophilus RNA polymerase de novo transcription initiation complex Heteromer
Q5SKW1; Q8RQE7; Q8RQE8; Q9Z9H6;
2TM;ZN;MG;ATP;4q4z1-1118
Crystal structure of Thermus thermophilus transcription initiation complex Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
MG;ZN;4g7h1-1118
X-ray crystal structure of a bacterial reiterative transcription complex of pyrBI promoter Heteromer
Q5SHR6; Q72L95; Q8RQE7; Q8RQE8;
UTP;MG;ZN;6p711-1118
'Crystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNA' Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
ZN;MG;4g7o1-1118
'X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter varian... Heteromer
Q5SHR6; Q72L95; Q8RQE7; Q8RQE8;
MG;ZN;POP;6ovy1-1118
Thermus thermophilus RNA polymerase initially transcribing complex containing 6-mer RNA Heteromer
Q5SKW1; Q8RQE7; Q8RQE8; Q9Z9H6;
MG;ZN;ATP;4q5s1-1118
'Crystal structure of Thermus thermophilus product complex for transcription initiation with NAD ... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
C;MG;CTP;ZN;NAD;5d4d1-1118
'X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter at 7 min' Heteromer
Q5SHR6; Q72L95; Q8RQE7; Q8RQE8;
MG;ZN;POP;6oy71-1118
X-ray crystal structure of bacterial RNA polymerase and pyrBI promoter complex Heteromer
Q5SHR6; Q72L95; Q8RQE7; Q8RQE8;
MG;ZN;6p701-1118
Crystal structure of Thermus thermophilus product complex for transcription initiation with 3'-de... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
C;DPO;MG;ZN;COD;5d4e1-1118
'X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter at 5 min' Heteromer
Q5SHR6; Q72L95; Q8RQE7; Q8RQE8;
GTP;MG;ZN;6oy61-1118
'X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter at 3 min' Heteromer
A0A1J1EUF1; Q72L95; Q8RQE8; Q9Z9H6;
GTP;MG;ZN;6oy51-1118
'Crystal structure of Thermus thermophilus pre-insertion substrate complex for de novo transcript... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
2TM;ZN;MG;ATP;4oio1-1118
'Crystal structure of Thermus thermophilus RNA polymerase transcription initiation complex soaked... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
ZN;MG;MB8;RFV;4oir1-1118
T. thermophilus transcription initiation complex having a RRR discriminator sequence and a nontem... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
MG;ZN;5e171-1118
'Crystal structure of Thermus thermophilus product complex for transcription initiation with ATP ... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
C;MG;CTP;ZN;ATP;5d4c1-1118
T. thermophilus transcription initiation complex having a YYY discriminator sequence and a nontem... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
MG;ZN;5e181-1118
X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
MG;ZN;POP;5vo81-1118
'Crystal structure of Thermus thermophilus transcription initiation complex with GpA and pseudour... Heteromer
Q5SHR6; Q72ID6; Q72L95; Q8RQE8;
PUM;MG;ZN;5x211-1118
'Crystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPP' Heteromer
Q5SHR6; Q72ID6; Q72L95; Q8RQE8;
2TM;MG;ZN;5x221-1118
'Crystal structure of Thermus thermophilus transcription initiation complex soaked with GE23077, ... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
MG;MB8;ZN;ATP;4oip1-1118
RNA polymerase-gp39 complex Heteromer
A7XX65; Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
ZN;3wod1-1118
'Crystal structure of Thermus thermophilus transcription initiation complex soaked with GE23077 a... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
ZN;MB8;MG;4oiq1-1118
'Crystal structure of Thermus thermophilus transcription initiation complex containing 5-BrU at t... Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
ZN;MG;4g7z1-1118
'Crystal structure of T. thermophilus TTHB099 class II transcription activation complex: TAP-RPo' Heteromer
Q53W63; Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
ZN;MG;5i2d1-1118
Crystal structure of Thermus thermophilus RNA polymerase core enzyme Heteromer
Q5SHR6; Q8RQE7; Q8RQE8;
ZN;MG;6asg1-1116
T. thermophilus RNA polymerase holoenzyme bound with gp39 and gp76 Heteromer
A7XX65; A7XXA7; Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE8;
ZN;5xj01-1114
Crystal structures of bacterial RNA Polymerase paused elongation complexes Heteromer
Q5SHR6; Q8RQE7; Q8RQE8;
ZN;MG;4gzy1-1112
RNA polymerase-Gfh1 complex (Crystal type 1) Heteromer
Q5SHR6; Q5SJG6; Q8RQE7; Q8RQE8;
ZN;MG;3aoh1-1112
Crystal structures of bacterial RNA Polymerase paused elongation complexes Heteromer
Q5SHR6; Q8RQE7; Q8RQE8;
ZN;MG;4gzz1-1112
RNA polymerase-Gfh1 complex (Crystal type 2) Heteromer
Q5SHR6; Q5SJG6; Q8RQE7; Q8RQE8;
ZN;MG;3aoi1-1112
'Thermus thermophilus RNA polymerase complexed with an RNA cleavage stimulating factor (a GreA/Gf... Heteromer
Q5SHR6; Q5SJG6; Q5SKM1; Q8RQE7; Q8RQE8;
ZN;MG;4wqt1-1112
'Crystal structure of P23-45 gp39 (6-109) bound to Thermus thermophilus RNA polymerase beta-flap ... Heteromer
A7XX65;
3woe703-830
'Crystal structure of P23-45 gp39 (6-132) bound to Thermus thermophilus RNA polymerase beta-flap ... Heteromer
A7XX65;
3wof703-829