Q91B85 (POLG_ALKV) Alkhumra hemorrhagic fever virus (ALKV) (Alkhurma hemorrhagic fever virus)

Genome polyprotein UniProtKBInterProInteractive Modelling

3416 aa; Sequence (Fasta)

Molecule Processing
Capsid protein C
Protein prM
Peptide pr
Small envelope protein M
Envelope protein E
Non-structural protein 1
Non-structural protein 2A
Serine protease subunit NS2B
Serine protease NS3
Non-structural protein 4A
Non-structural protein 4B
RNA-directed RNA polymerase NS5

Sequence Features

 1545Charge relay system; for serine protease NS3 activity
 1569Charge relay system; for serine protease NS3 activity
 1629Charge relay system; for serine protease NS3 activity
 2574For 2'-O-MTase activity
 2659For 2'-O-MTase activity
 2696For 2'-O-MTase activity
 2732For 2'-O-MTase activity
 2952Zinc 1
 2956Zinc 1; via tele nitrogen
 2961Zinc 1
 2964Zinc 1
 3226Zinc 2; via tele nitrogen
 3242Zinc 2
 3361Zinc 2
 1951Involved in NS3 ATPase and RTPase activities
 1954Involved in NS3 ATPase and RTPase activities
 2526mRNA cap binding
 2529mRNA cap binding; via carbonyl oxygen
 2530mRNA cap binding
 2532mRNA cap binding; via carbonyl oxygen
 2537mRNA cap binding
 2541mRNA cap binding
 2574Essential for 2'-O-methyltransferase activity
 2659Essential for 2'-O-methyltransferase and N-7 methyltransferase activity
 2663mRNA cap binding
 2696Essential for 2'-O-methyltransferase activity
 2727mRNA cap binding
 2729mRNA cap binding
 2732Essential for 2'-O-methyltransferase activity
 100-120Helical
 244-261Helical
 263-281Helical
 729-749Helical
 757-777Helical
 1135-1155Helical
 1163-1183Helical
 1190-1210Helical
 1236-1256Helical
 1296-1316Helical
 1362-1379Helical
 1385-1405Helical
 1459-1479Helical
 2163-2183Helical
 2192-2211Helical
 2213-2233Helical
 2247-2267Helical
 2302-2322Helical
 2346-2366Helical
 2369-2389Helical
 2433-2453Helical
 2477-2497Helical
 1690-1697ATP
 97-98Cleavage; by viral protease NS3
 118-119Cleavage; by host signal peptidase
 206-207Cleavage; by host furin
 281-282Cleavage; by host signal peptidase
 777-778Cleavage; by host signal peptidase
 1130-1131Cleavage; by host
 1360-1361Cleavage; by viral protease NS3
 1491-1492Cleavage; by autolysis
 2112-2113Cleavage; by autolysis
 2238-2239Cleavage; by viral protease NS3
 2261-2262Cleavage; by host signal peptidase
 2513-2514Cleavage; by viral protease NS3
 284-311
 341-402
 341-397
 355-386
 373-402
 373-397
 467-571
 588-619
 781-792
 832-922
 957-1002
 1059-1108
 1070-1092
 1091-1095
 5-116Flavivirus capsid protein C
IPR001122PF01003
 134-207Flavivirus polyprotein propeptide
IPR002535PF01570
 283-582Flavivirus glycoprotein central and dimerisation domain
IPR011998PF00869
 585-674Flavivirus glycoprotein E, immunoglobulin-like domain
IPR027287PF02832
 780-1131Flavivirus non-structural protein NS1
IPR001157PF00948
 1143-1303Flavivirus non-structural protein NS2A
IPR000752PF01005
 1364-1484Flavivirus non-structural protein NS2B
IPR000487PF01002
 1509-1660Flavivirus NS3, petidase S7
IPR001850PF00949
 1681-1826DEAD box, Flavivirus
IPR011492PF07652
 2117-2256Flavivirus non-structural protein NS4A
IPR000404PF01350
 2262-2505Flavivirus non-structural protein NS4B
IPR001528PF01349
 2568-2735Ribosomal RNA methyltransferase FtsJ domain
IPR002877PF01728
 2769-3404RNA-directed RNA polymerase, flavivirus
IPR000208PF00972

Sequence Alignments

Envelope protein E 282-777; PRO_0000441430

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)DownloadAssess
monomer -3.455o6v.1.C282-773
80.24

Serine protease NS3 1492-2112; PRO_0000441434

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)DownloadAssess
monomer MN;-2.382whx.1.A1514-2112
44.43
monomer -3.382wzq.1.A1513-2112
45.64
monomer -3.082wv9.1.A1514-2111
46.79

RNA-directed RNA polymerase NS5 2514-3416; PRO_0000441438

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)DownloadAssess
monomer ZN;-2.435tfr.1.A2519-3398
57.78
monomer ZN;MG;-3.135dto.1.A2518-3397
58.24