Q92908 (GATA6_HUMAN) Homo sapiens (Human)

Transcription factor GATA-6 UniProtKBInterproStringInteractive Modelling

595 aa; Sequence (Fasta) ; (Isoform 2; )

Sequence Features

 15G -> R (in dbSNP:rs116262672). VAR_067380 dbSNP
 91P -> S (probable disease-associated mutation found in patients with atrial fibrillation; gain of function; no effect on subcellular localization; dbSNP:rs766886560). VAR_078427 dbSNP
 177A -> T (probable disease-associated mutation found in patients with atrial fibrillation; gain of function; no effect on subcellular localization). VAR_078428
 178A -> V (in AVSD5; increased transcriptional activity; dbSNP:rs387906815). VAR_067381 dbSNP
 184S -> N (in ASD9 and TOF; loss of transcriptional activity; dbSNP:rs387906816). VAR_067382 dbSNP
 198L -> V (in TOF; uncertain pathological significance; does not affect transcriptional activity; dbSNP:rs387906814). VAR_067383 dbSNP
 235Y -> S (probable disease-associated mutation found in patients with atrial fibrillation; significant loss of transcriptional activator activity). VAR_078429
 452T -> A (in PACHD; dbSNP:rs387906817). VAR_067384 dbSNP
 456R -> C (in PACHD; loss of transcriptional activity; dbSNP:rs387906818). VAR_067385 dbSNP
 456R -> H (in PACHD; dbSNP:rs387906819). VAR_067386 dbSNP
 466N -> D (in PACHD; loss of transcriptional activity; dbSNP:rs387906813). VAR_067387 dbSNP
 466N -> H (in CTHM; persistent truncus arteriosus; loss of transcriptional activity; dbSNP:rs387906813). VAR_067388 dbSNP
 467A -> T (in PACHD; loss of transcriptional activity; dbSNP:rs387906820). VAR_067389 dbSNP
 469G -> V (probable disease-associated mutation found in patients with atrial fibrillation; significant loss of transcriptional activator activity). VAR_078430
 473K -> Q (in PACHD; loss of transcriptional activity). VAR_067390
 543A -> G (probable disease-associated mutation found in patients with atrial fibrillation; gain of function; no effect on subcellular localization; dbSNP:rs761668180). VAR_078431 dbSNP
 585R -> L (probable disease-associated mutation found in patients with atrial fibrillation; gain of function; no effect on subcellular localization; dbSNP:rs201707559). VAR_078432 dbSNP
 390-414GATA-type 1.
 444-468GATA-type 2.
 147-377GATA-type transcription activator, N-ter minal
IPR008013PF05349
 390-423Zinc finger, GATA-type
IPR000679PF00320
 444-477Zinc finger, GATA-type
IPR000679PF00320

Sequence Alignments

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
monomer ZN;-1.194hc9.1.A388-492
78.50
monomer ZN;-1.762gat.1.C439-502
62.50
monomer ZN;-2.074hc7.1.A388-492
78.50
monomer -2.781gnf.1.A386-429
79.55
monomer ZN;-3.392m9w.1.A435-494
91.67
monomer ZN;-3.594hc7.2.A388-492
78.50

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
2monomerZN;-1.194hc9.1.A242-346
78.50
2monomerZN;-1.663gat.1.C293-356
62.50
2monomerZN;-2.064hc7.1.A242-346
78.50
2monomer-2.781gnf.1.A240-283
79.55
2monomerZN;-3.382m9w.1.A289-348
91.67
2monomerZN;-3.584hc7.2.A242-346
78.50