Q99836 (MYD88_HUMAN) Homo sapiens (Human)

Myeloid differentiation primary response protein MyD88 UniProtKBInterproStringInteractive Modelling

296 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; )

Sequence Features

 34S -> Y (rare functional polymorphism; loss of NF-kappa-B complex activation; loss of interaction with IRAK4; reduces homooligomerization; dbSNP:rs1319438). VAR_072893 dbSNP
 39V -> M (found in hematological malignancies; somatic mutation; unknown pathological significance; dbSNP:rs770387646). VAR_073252 dbSNP
 52Missing (in MYD88D; loss of NF-kappa-B complex activation). VAR_072894
 93L -> P (in MYD88D; results in a loss of function; loss of NF-kappa-B complex activation; dbSNP:rs137853065). VAR_047953 dbSNP
 98R -> C (found in hematological malignancies; somatic mutation; unknown pathological significance; loss of NF- kappa-B complex activation; loss of interaction with IRAK4; reduces homooligomerization; dbSNP:rs199396). VAR_072895 dbSNP
 136S -> G (found in hematological malignancies; somatic mutation; unknown pathological significance). VAR_073253
 136S -> I (found in hematological malignancies; somatic mutation; unknown pathological significance). VAR_073254
 178M -> I (found in hematological malignancies; somatic mutation; unknown pathological significance; no effect on NF-kappaB complex activation; dbSNP:rs41285117). VAR_072896 dbSNP
 196R -> C (in MYD88D; results in a loss of function; decreases NF-kappa-B complex activation; dbSNP:rs137853064). VAR_047954 dbSNP
 204V -> F (found in hematological malignancies; somatic mutation; unknown pathological significance; dbSNP:rs776995408). VAR_073255 dbSNP
 205W -> R (found in hematological malignancies; somatic mutation; unknown pathological significance). VAR_073256
 206S -> C (found in hematological malignancies; somatic mutation; unknown pathological significance). VAR_073257
 207I -> T (found in hematological malignancies; somatic mutation; unknown pathological significance). VAR_073258
 209S -> R (found in hematological malignancies; somatic mutation; unknown pathological significance; constitutively activates NF-kappaB complex activation). VAR_073259
 219M -> T (found in hematological malignancies; somatic mutation; unknown pathological significance; constitutively activates NF-kappaB complex activation). VAR_073260
 230S -> N (found in hematological malignancies; somatic mutation; unknown pathological significance; constitutively activates NF-kappaB complex activation; dbSNP:rs1353791431). VAR_073261 dbSNP
 252L -> P (found in hematological malignancies; common mutation in Waldenstroem macroglobulinemia; somatic mutation; unknown pathological significance; constitutively activates NF-kappaB complex activation; gain-of- function mutation; does not affect interaction with IRAK4; dbSNP:rs387907272). VAR_073262 dbSNP
 281T -> P (found in hematological malignancies; somatic mutation; unknown pathological significance; no effect on NF-kappaB complex activation). VAR_073263
 30-102Death domain
IPR000488PF00531
 173-263Toll/interleukin-1 receptor homology (TI R) domain
IPR000157PF01582

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownload
The ternary Death Domain complex of MyD88, IRAK4, and IRAK2 Heteromer
Q99836; Q9NWZ3; O43187;
3mop20-117
'Solution NMR structure of human myeloid differentiation primary response (MyD88). Northeast Stru...monomer 2js7146-296
Solution structure of the TIR domain of human MyD88monomer 2z5v156-296
'Crystal structure of the TIR domain of human myeloid differentiation primary response protein 88.'monomer MG;4eo7157-296
'Crystal Structure of the TIR-domain of Human Myeloid Differentiation Primary Response protein (M...monomer 4dom157-296

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
6monomer-2.543mop.1.A26-117
100.00
3monomer-2.593mop.1.C26-117
100.00
2monomer-3.003mop.1.A26-109
100.00
4monomer-3.373mop.1.B20-117
91.84
5monomer-3.393mop.1.C1-96
98.96
5monomer-3.712js7.1.A125-275
100.00
2monomer-4.342js7.1.A105-251
97.28