Q9BY41 (HDAC8_HUMAN) Homo sapiens (Human)

Histone deacetylase 8 UniProtKBInterProSTRINGInteractive Modelling

377 aa; Sequence (Fasta) ; (Isoform 4; Isoform 5; Isoform 6; Isoform 7; Isoform 8); 3 identical sequences: Pan troglodytes: A0A2I3TSB3, A0A6D2XN81; Pan paniscus: A0A2R8ZNP2

Available Structures

53 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Crystal structure of HDAC8-substrate complex
2v5w
 Heteromer
P04637; 		15-377
2×K; 1×ZN;
Assess
Crystal Structure Analysis of human HDAC8 H143A variant complexed with substrate.
3ewf
homo-4-mer14-377
6×ZN; 8×K; 4×MCM;
Assess
Crystal structure of C153F HDAC8 in complex with SAHA
4qa0
homo-2-mer14-377
2×ZN; 4×K; 2×SHH; 2×GOL;
Assess
Crystal Structure of Human HDAC8 complexed with CRA-19156
1vkg
homo-2-mer15-377
2×ZN; 2×NA; 2×CRI;
Assess
HDAC8 Complexed with a Hydroxamic Acid
5fcw
monomer13-377
1×5YA; 1×ZN; 1×K; 1×P6G;
Assess
Crystal structure of H334R HDAC8 in complex with M344
4qa4
monomer13-377
1×B3N; 1×ZN; 2×K; 3×GOL;
Assess
Crystal structure of H334R/Y306F HDAC8 in complex with a tetrapeptide substrate
4qa7
monomer13-377
1×ZN; 2×K; 1×MCM; 1×GOL;
Assess
Crystal Structure Analysis of Human HDAC8 complexed with trichostatin A in a new monoclinic crystal…
3f0r
monomer13-377
1×ZN; 2×K; 2×TSN;
Assess
Crystal structure of HDAC8 in complex with compound 3
6odb
monomer13-377
1×M8G; 1×ZN; 2×K; 3×GOL;
Assess
Crystal Structure Analysis of Human HDAC8 complexed with APHA in a new monoclinic crystal form
3f07
monomer13-377
2×ZN; 2×K; 1×AGE;
Assess
Crystal structure of D233G-Y306F HDAC8 in complex with a tetrapeptide substrate
5d1c
monomer14-377
2×K; 1×ZN;
Assess
Crystal structure of human histone deacetylase 8 (HDAC8) I45T mutation complexed with SAHA
7jvu
monomer14-377
1×ZN; 2×K; 1×SHH; 4×EDO;
Assess
Crystal structure of S39E HDAC8 in complex with Droxinostat
5bwz
monomer14-377
1×ZN; 2×K; 1×XCH;
Assess
Crystal structure of A188T/Y306F HDAC8 in complex with a tetrapeptide substrate
4qa5
monomer14-377
1×ZN; 2×K; 1×GOL; 1×MG; 1×MCM;
Assess
Crystal structure of S39D HDAC8 in complex with a largazole analogue.
4rn0
monomer14-377
1×L6G; 1×ZN; 2×K; 1×IMD; 1×GOL;
Assess
Crystal Structure Analysis of human HDAC8 D101L variant
3ew8
monomer14-377
2×K; 1×ZN; 1×B3N; 1×BME; 3×GOL;
Assess
Crystal structure of D101L Mn2+ HDAC8 complexed with M344
3mz4
monomer14-377
1×MN; 2×K; 1×B3N; 1×GOL;
Assess
Crystal Structure of human HDAC8 complexed with Trichostatin A
1t64
monomer14-377
1×ZN; 2×CA; 2×NA; 2×TSN;
Assess
Crystal Structure of G302A HDAC8 in complex with M344
5ths
monomer14-377
1×ZN; 2×K; 1×B3N; 7×EDO;
Assess
Crystal structure of D101L Co2+ HDAC8 complexed with M344
3mz7
monomer14-377
1×CO; 2×K; 1×B3N; 1×GOL;
Assess
Crystal structure of D176N HDAC8 in complex with M344
5dc5
monomer14-377
1×K; 1×B3N; 1×ZN;
Assess
Crystal Structure of G304A HDAC8 in complex with M344
5thu
monomer14-377
1×ZN; 2×K; 1×B3N;
Assess
Crystal Structure of Human HDAC8 Inhibitor Complex, an Amino Acid Derived Inhibitor
3sff
monomer14-377
1×0DI; 2×K; 1×ZN;
Assess
Crystal structure of D101L Fe2+ HDAC8 complexed with M344
3mz6
monomer14-377
1×FE2; 2×K; 1×B3N;
Assess
Crystal structure of P91L-Y306F HDAC8 in complex with a tetrapeptide substrate
5d1d
monomer14-377
1×ZN; 2×K;
Assess
Crystal structure of I243N/Y306F HDAC8 in complex with a tetrapeptide substrate
4qa6
monomer14-377
1×ZN; 2×K; 1×GOL; 1×MCM;
Assess
Crystal structure of a human HDAC8 L6 loop mutant complexed with Quisinostat
6hsk
monomer14-377
1×ZN; 2×K; 1×GOK;
Assess
Ideal Thiolate-Zinc Coordination Geometry in Depsipeptide Binding to Histone Deacetylase 8
3rqd
monomer14-377
1×ZN; 2×K;
Assess
Crystal structure of S39D HDAC8 in complex with a largazole analogue.
4rn1
monomer14-377
1×ZN; 2×K; 1×L8G; 1×IMD; 1×GOL;
Assess
Crystal structure of D176A-Y306F HDAC8 in complex with a tetrapeptide substrate
5dc7
monomer13-376
1×ZN; 1×K; 1×GOL;
Assess
Crystal Structure of Human HDAC8 complexed with MS-344
1t67
monomer14-377
1×ZN; 2×NA; 1×B3N;
Assess
Crystal structure of I243N HDAC8 in complex with SAHA
4qa2
monomer14-377
2×K; 1×ZN; 1×SHH;
Assess
Crystal Structure of G303A HDAC8 in complex with M344
5tht
monomer14-377
1×B3N; 1×ZN; 2×K; 6×EDO;
Assess
Crystal Structure Analysis of Human HDAC8 D101A Variant.
3f06
monomer14-377
1×ZN; 2×K; 1×B3N; 1×BME;
Assess
Crystal Structure Analysis of human HDAC8 D101N variant
3ezp
monomer14-377
1×ZN; 2×K; 1×B3N; 1×BME;
Assess
Crystal Structure of Human HDAC8 Inhibitor Complex, an Amino Acid Derived Inhibitor
3sfh
monomer14-377
2×K; 1×ZN; 3×ACT; 1×1DI;
Assess
Crystal structure of HDAC8 in complex with compound 30
6odc
monomer14-377
1×ZN; 2×K; 1×M7Y; 3×EDO;
Assess
Crystal Structure Analysis of Human HDAC8 D101E Variant
3ezt
monomer14-377
1×ZN; 2×K; 1×B3N; 1×BME;
Assess
Crystal structure of T311M HDAC8 in complex with Trichostatin A (TSA)
4qa3
monomer14-377
1×TSN; 1×ZN; 2×K; 2×GOL;
Assess
Crystal structure of HDAC8 in complex with compound 2
6oda
monomer14-377
1×C7; 1×ZN; 2×K;
Assess
Crystal structure of G117E HDAC8 in complex with TSA
5d1b
monomer14-377
1×ZN; 2×K; 1×TSN;
Assess
Crystal Structure of human HDAC8 complexed with SAHA
1t69
monomer14-377
1×ZN; 1×SHH;
Assess
Crystal structure of Co2+ HDAC8 complexed with M344
3mz3
monomer14-377
1×CO; 2×K; 1×B3N;
Assess
Crystal structure of H142A-Y306F HDAC8 in complex with a tetrapeptide substrate
5dc8
monomer14-376
1×ZN; 2×K; 1×GOL;
Assess
Crystal structure of D176N-Y306F HDAC8 in complex with a tetrapeptide substrate
5dc6
monomer14-376
1×ZN; 1×K; 1×GOL;
Assess
Crystal structure of A188T HDAC8 in complex with M344
4qa1
monomer14-376
2×K; 1×ZN; 1×B3N; 1×GOL;
Assess
Crystal structure of HDAC8-inhibitor complex
2v5x
monomer14-376
1×ZN; 2×K; 1×V5X;
Assess
Crystal structure of S39D HDAC8 in complex with a largazole analogue.
4rn2
monomer15-377
1×ZN; 2×K; 1×L7G;
Assess
Crystal structure of human histone deacetylase 8 (HDAC8) G320R mutation complexed with M344
7jvw
monomer14-376
1×B3N; 1×ZN; 2×K;
Assess
Crystal structure of inhibited human HDAC8
1w22
monomer13-375
1×ZN; 2×K; 1×NHB;
Assess
Crystal structure of human histone deacetylase 8 (HDAC8) E66D/Y306F double mutation complexed with …
7jvv
monomer15-376
4×EDO; 1×ZN; 2×K; 1×GOL;
Assess
Crystal Structure of G305A HDAC8 in complex with M344
5thv
monomer15-376
1×ZN; 2×K; 1×B3N; 14×EDO;
Assess
Crystal structure of histone deacetylase 8 in complex with trapoxin A
5vi6
monomer14-374
1×ZN; 2×K; 10×EDO; 2×DIO;
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
5fcw.1.Amonomer0.9313-377
1×5YA; 1×ZN; 1×K;100.00
Assess

5 SWISS-MODEL models built on isoform sequence

TemplateIsoformOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 43ew8.1.Amonomer0.8814-285
2×K; 1×ZN;98.25
Assess
Isoform 52v5w.1.Amonomer0.8915-256
2×K;96.48
Assess
Isoform 65d1b.1.Amonomer0.5514-139
87.05
Assess
Isoform 74qa7.1.Amonomer0.8413-155
94.84
Assess
Isoform 85dc6.1.Amonomer0.8514-146
100.00
Assess