Q9JJX7 (TYDP2_MOUSE) Mus musculus (Mouse)

Tyrosyl-DNA phosphodiesterase 2 UniProtKBInterProSTRINGInteractive Modelling

370 aa; Sequence (Fasta)

Sequence Features

 272Proton donor/acceptor.
 132Magnesium.
 162Magnesium.
 188Interaction with 5' end of substrate DNA.
 307Interaction with 5' end of substrate DNA.
 325Interaction with 5' end of substrate DNA.
 359Interaction with 5' end of substrate DNA.
 128-359Endonuclease/exonuclease/phosphatase
IPR005135PF03372

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Mouse Tdp2 catalytic domain bound to SUMO2 Heteromer
P61957;
CA;ACT;5tvq118-370
SUMO2 bound to Mouse Tdp2 catalytic domain with a 5'-phosphorylated DNA ternary complex Heteromer
Q9JJX7; P61957;
PO4;EDO;CL;5tvp118-370
Mouse Tdp2 reaction product (5'-phosphorylated DNA)-Mg2+ complex with 1-N6-etheno-adeninehomo-2-mer PEG;MG;EPE;5ht2118-370
Mus Musculus Tdp2 reaction product (5'-phosphorylated DNA)-Mg2+ complex at 1.5 Angstroms resolutionhomo-2-mer MG;EPE;FMT;4gz1118-370
Mouse Tdp2 reaction product (5'-phosphorylated DNA)-Mg2+ complex with deoxyadenosinehomo-2-mer PEG;MG;EPE;5inl118-370
Mus Musculus Tdp2 reaction product complex with 5'-phosphorylated RNA/DNA, glycerol, and Mg2+homo-2-mer GOL;MG;ACT;4puq118-370
Mouse Tdp2 reaction product (5'-phosphorylated DNA)-Ca2+ complexhomo-2-mer EPE;GOL;CA;PEG;5inq118-370
Mouse Tdp2 reaction product (5'-phosphorylated DNA)-Mn2+ complexhomo-2-mer EPE;MN;5inp118-370
Mouse Tdp2 reaction product (5'-phosphorylated DNA)-abasic/THF-Mg2+ complexhomo-2-mer PEG;GOL;MG;EPE;5ink118-370
Mus Musculus Tdp2 excluded ssDNA complexhomo-2-mer FMT;MG;4gz2122-369
Mus Musculus Tdp2-DNA Substrate Analog (5'-6-aminohexanol) Complexmonomer 6AH; 25×EDO;ACT;4gz0121-370
Crystal structure of m2hTDP2-CAT in complex with a small molecule inhibitormonomer GOL;MG; 11×EDO;6FQ;ACT;5j3z122-370
Crystal structure of m2hTDP2-CAT in complex with a small molecule inhibitormonomer 6FV;TLA;MN;EDO;GOL;5j42123-370
Mouse Tdp2 protein, apo state with variable DNA-binding grasp conformationsmonomer GOL;MG;5inm122-369
Mus Musculus Tdp2 Bound to dAMP and Mg2+monomer MG;D5M;4gyz123-370
'Mouse Tdp2 D358N protein, apo state with increased disorder amongst variable DNA-binding grasp c...monomer GOL;SO4;5inn122-369

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer -3.054gew.1.A34-368
33.44