Q9NVU7 | SWISS-MODEL Repository

Q9NVU7 (SDA1_HUMAN) Homo sapiens (Human)

Protein SDA1 homolog UniProtKB InterPro STRING Interactive Modelling

687 aa; Sequence (Fasta) ; (Isoform 2); 3 identical sequences: Pan troglodytes: H2QZJ2, A0A6D2XY86; Pan paniscus: A0A2R9BSC6

It is possible new templates exist for this target since these models were created.

Available Structures

5 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
human nuclear pre-60S ribosomal particle - State F	8inf SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer E9PRG8; O00488; O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q96EY4; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	2-687	1×GDP; 1×MG; 1×K;
Assess
human nuclear pre-60S ribosomal particle - State F	8idy SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O00488; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q96EY4; Q9BRT6; Q9BZE4; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	2-687	1×GDP; 1×MG; 1×K;
Assess
Human nuclear pre-60S ribosomal subunit (State I3)	8fl4 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O00488; O00541; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P63173; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q8IZL8; Q9BRT6; Q9BV38; Q9BVP2; Q9BZE4; Q9H6F5; Q9NVX2; Q9NXF1; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8; Q9Y4W2;	6-576	99×MG; 5×ZN; 1×GTP; 2×K; 1×GDP;
Assess
human nuclear pre-60S ribosomal particle - State D	8ink SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O00488; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P84098; Q02543; Q02878; Q07020; Q13823; Q9BRT6; Q9BVP2; Q9BZE4; Q9H6F5; Q9NVX2; Q9UHA3; Q9UKD2; Q9Y3U8;	24-442	1×GTP; 1×MG;
Assess
human nuclear pre-60S ribosomal particle - State D	8ipy SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O00488; O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q9BRT6; Q9BVP2; Q9BYG3; Q9BZE4; Q9H6F5; Q9NVX2; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8;	24-442	1×GTP; 1×MG;
Assess

3 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
8fl2.39.A	monomer	0.76	6-576		100.00
Assess
8inf.1.B	monomer	0.71	2-687		100.00
Assess
5w0w.2.A	monomer	0.51	80-442		11.48
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

3 SWISS-MODEL models built on isoform sequence

Template	Isoform	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	8fl2.39.A	monomer	0.73	1-479		100.00
Assess
Isoform 2	8inf.1.B	monomer	0.67	1-590		100.00
Assess
Isoform 2	6s9o.3.A	monomer	0.53	19-341		12.54
Assess

Alignments