Q9UBN7 (HDAC6_HUMAN) Homo sapiens (Human)

Histone deacetylase 6 UniProtKBInterProSTRINGInteractive Modelling

1215 aa; Sequence (Fasta) ; (Isoform 2)

Available Structures

21 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
HDAC6 ZnF domain inhibitor - DARPin (Designed Ankyrin repeat protein) F10
7zyu
 Heteromer
1108-1212
3×ZN; 3×EDO;
Assess
Crystal structure of human HDAC6 in complex with ubiquitin
3phd
 Heteromer
P0CG47; 		1109-1210
12×ZN;
Assess
Crystal structure of human histone deacetylase 6 catalytic domain 2 in complex with trichostatin A
5edu
monomer479-835
1×GLC; 1×TSN; 1×ZN; 2×K;
Assess
Crystal structure of human HDAC6 zinc finger domain
3c5k
monomer1109-1215
3×ZN;
Assess
Crystal structure of fragment 3-(3-Benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic …
5wbn
monomer1108-1209
3×ZN; 1×9ZV; 8×UNX; 3×FMT; 1×CL; 2×ACT;
Assess
Crystal structure of a low occupancy fragment candidate (N-(4-Methyl-1,3-thiazol-2-yl)propanamide) …
5b8d
monomer1109-1208
3×ZN; 2×FMT; 1×6T4; 36×UNX; 1×NA;
Assess
Crystal structure of a low occupancy fragment candidate (5-[(4-Isopropylphenyl)amino]-6-methyl-1,2,…
5kh9
monomer1109-1208
3×ZN; 1×FMT; 1×6T5; 33×UNX; 1×NA;
Assess
Crystal structure of fragment 2-(Benzo[d]thiazol-2-yl)acetic acid bound in the ubiquitin binding po…
6ce8
monomer1109-1208
3×ZN; 4×UNX; 1×EYV;
Assess
Crystal structure of fragment 3-(3-(pyridin-2-ylmethoxy)quinoxalin-2-yl)propanoic acid bound in the…
5wpb
monomer1109-1208
3×ZN; 1×B8P; 17×UNX;
Assess
Structure of HDAC6 zinc-finger ubiquitin binding domain soaked with 3,3'-(benzo[1,2-d:5,4-d']bis(th…
6ce6
monomer1109-1208
3×ZN; 3×UNX; 1×EYP;
Assess
Crystal structure of fragment (3-(5-Chloro-1,3-benzothiazol-2-yl)propanoic acid) bound in the ubiqu…
5kh3
monomer1109-1208
3×ZN; 13×UNX; 1×6U6;
Assess
Crystal structure of fragment (3-[6-Oxo-3-(3-pyridinyl)-1(6H)-pyridazinyl]propanoic acid) bound in …
5kh7
monomer1109-1208
3×ZN; 1×6T7; 15×UNX;
Assess
Crystal structure of fragment 3-(1,3-Benzothiazol-2-yl)propanoic acid bound in the ubiquitin bindin…
6cef
monomer1109-1208
3×ZN; 3×UNX; 1×EYJ;
Assess
Structure of HDAC6 zinc-finger ubiquitin binding domain in complex with 3-(3-(2-(benzylamino)-2-oxo…
8g44
monomer1109-1207
3×ZN; 1×ZU9;
Assess
Crystal structure of fragment 3-(3-Methoxy-2-quinoxalinyl)propanoic acid bound in the ubiquitin bin…
6cec
monomer1109-1207
3×ZN; 5×UNX; 1×EY7;
Assess
Structure of HDAC6 zinc-finger ubiquitin binding domain in complex with 3-(3-(2-(methylamino)-2-oxo…
8g43
monomer1109-1207
3×ZN; 1×ZU6;
Assess
Crystal structure of fragment 3-(1-Methyl-2-oxo-1,2-dihydroquinoxalin-3-yl)propionic acid bound in …
6cee
monomer1109-1207
3×ZN; 1×EYM; 4×UNX;
Assess
Crystal structure of fragment 3-(quinolin-2-yl)propanoic acid bound in the ubiquitin binding pocket…
6cea
monomer1109-1207
3×ZN; 3×UNX; 1×EYY;
Assess
Structure of HDAC6 zinc-finger ubiquitin binding domain in complex with SGC-UBD253 chemical probe
8g45
monomer1109-1207
3×ZN; 1×ZUE;
Assess
Crystal structure of fragment 3-(3-Methyl-4-oxo-3,4-dihydroquinazolin-2-yl)propanoic acid bound in …
6ced
monomer1109-1207
3×ZN; 1×EYA; 1×UNX;
Assess
Crystal structure of human HDAC6 zinc finger domain and ubiquitin C-terminal peptide RLRGG
3gv4
monomer1109-1207
3×ZN; 1×CA;
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
5g0j.1.Amonomer0.8276-839
1×ZN; 3×K; 1×N4R;57.27
Assess

2 SWISS-MODEL models built on isoform sequence

TemplateIsoformOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 27qno.1.Amonomer0.838-687
2×K; 1×ZN;59.31
Assess
Isoform 27u59.1.Amonomer0.614-687
1×ZN;37.82
Assess