Q9UQD0 | SWISS-MODEL Repository

Q9UQD0 (SCN8A_HUMAN) Homo sapiens (Human)

Sodium channel protein type 8 subunit alpha UniProtKB InterPro STRING Interactive Modelling

1980 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5); 2 identical sequences: Pan troglodytes: A0A2J8KDL9; Pan paniscus: A0A2R9CPA9

It is possible new templates exist for this target since these models were created.

Available Structures

3 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
Cryo-EM structure of human voltage-gated sodium channel Nav1.6	8fhd SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer Q07699;	11-1777	1×NAG; 1×NAG; 7×NAG; 4×Y01; 1×CLR; 5×LPE; 3×PCW; 2×P5S; 1×9Z9; 1×P3X;
Assess
Cryo-EM structure of human NaV1.6/beta1/beta2-4,9-anhydro-tetrodotoxin	8gz2 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O60939; Q07699;	106-1772	5×NAG; 2×NAG; 1×WMK;
Assess
Cryo-EM structure of human NaV1.6/beta1/beta2,apo state	8gz1 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O60939; Q07699;	128-1772	5×NAG; 2×NAG; 2×NA;
Assess

1 SWISS-MODEL model

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
7w9k.1.A	monomer	0.63	10-1897	2×Y01; 1×9Z9; 6×LPE; 1×1PW; 2×PCW;	72.34
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

6 SWISS-MODEL models built on isoform sequence

Template	Isoform	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	7w9k.1.A	monomer	0.63	10-1897	2×Y01; 1×9Z9; 6×LPE; 1×1PW; 2×PCW;	72.29
Assess
Isoform 3	6a90.1.A	monomer	0.63	1186-1892		43.25
Assess
Isoform 3	7w9k.1.A	monomer	0.63	10-1908	3×Y01; 1×9Z9; 6×LPE; 1×1PW; 2×PCW;	72.49
Assess
Isoform 4	7w9k.1.A	monomer	0.54	10-1278	2×Y01; 1×LPE; 1×PCW;	69.28
Assess
Isoform 5	6a90.1.A	monomer	0.64	1175-1840		44.04
Assess
Isoform 5	7w9k.1.A	monomer	0.63	10-1856	3×Y01; 1×9Z9; 5×LPE; 1×1PW; 2×PCW;	72.01
Assess

Alignments