Q9V2F4 (DP2L_PYRAB) Pyrococcus abyssi (strain GE5 / Orsay)
DNA polymerase II large subunit UniProtKBInterProSTRINGInteractive Modelling
1455 aa; Sequence (Fasta)
It is possible new templates exist for this target since these models were created.
Available Structures
8 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Ligands | ||
|---|---|---|---|---|---|---|
| Pyrococcus abyssi DNA polymerase D (PolD) in its editing mode bound to a primer/template substrate … |
Heteromer Q9UYX8; Q9V2F3; | 3×MG; 3×ZN; | ||||
| Assess | ||||||
| Pyrococcus abyssi DNA polymerase D (PolD) in its editing mode bound to a primer/template substrate … |
Heteromer Q9UYX8; Q9V2F3; | 3×MG; 3×ZN; | ||||
| Assess | ||||||
| Cryo-EM structure of the DNA-bound PolD-PCNA processive complex from P. abyssi |
Heteromer Q9UYX8; Q9V2F3; | 1×FE; 4×ZN; | ||||
| Assess | ||||||
| Intermediate conformer of Pyrococcus abyssi DNA polymerase D (PolD) bound to a primer/template subs… |
Heteromer Q9UYX8; Q9V2F3; | 3×MG; 3×ZN; | ||||
| Assess | ||||||
| Cryo-EM map of DNA polymerase D from Pyrococcus abyssi in complex with DNA |
Heteromer Q9V2F3; | 1×FE; 4×ZN; | ||||
| Assess | ||||||
| Structure of PCNA bound to cPIP motif of DP2 from P. abyssi |
Heteromer Q9UYX8; | |||||
| Assess | ||||||
| D-family DNA polymerase - DP2 subunit (catalytic subunit) | monomer | 2×ZN; | ||||
| Assess | ||||||
| Solution NMR structure of Pab PolII Intein | monomer | |||||
| Assess | ||||||
3 SWISS-MODEL models
| Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 2lcj.1.A | monomer | 0.80 | 96.69 | |||
| Assess | ||||||
| 5ijl.1.A | monomer | 0.77 | 2×ZN; | 98.66 | ||
| Assess | ||||||
| 8ppt.1.G | monomer | 0.70 | 1×MG; 3×ZN; | 100.00 | ||
| Assess | ||||||