- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 16 x ZN: ZINC ION(Non-covalent)
- 10 x ACT: ACETATE ION(Non-functional Binders)
ACT.4: 7 residues within 4Å:- Chain A: T.48, H.67, F.93, M.140, V.293
- Ligands: ZN.2, NAD.7
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:V.293
- Salt bridges: A:H.67
ACT.5: 4 residues within 4Å:- Chain A: L.223, H.270
- Ligands: ZN.3, NAD.7
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:H.270
ACT.6: 4 residues within 4Å:- Chain A: E.356, E.359
- Chain D: P.135, H.137
4 PLIP interactions:3 interactions with chain D, 1 interactions with chain A- Hydrogen bonds: D:T.127, D:T.127
- Salt bridges: D:H.137
- Hydrophobic interactions: A:E.359
ACT.13: 7 residues within 4Å:- Chain B: T.48, M.57, H.67, M.140, V.293
- Ligands: ZN.9, NAD.15
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:T.48, B:V.293
- Hydrogen bonds: B:T.48
- Salt bridges: B:H.67
ACT.14: 4 residues within 4Å:- Chain B: L.223, H.270
- Ligands: ZN.10, NAD.15
1 PLIP interactions:1 interactions with chain B- Salt bridges: B:H.270
ACT.21: 8 residues within 4Å:- Chain C: C.46, T.48, H.67, F.93, M.140, C.173
- Ligands: ZN.17, NAD.25
3 PLIP interactions:3 interactions with chain C- Hydrophobic interactions: C:F.93
- Hydrogen bonds: C:T.48
- Salt bridges: C:H.67
ACT.22: 3 residues within 4Å:- Chain C: H.270
- Ligands: ZN.18, NAD.25
1 PLIP interactions:1 interactions with chain C- Salt bridges: C:H.270
ACT.23: 2 residues within 4Å:- Chain C: D.340
- Ligands: ZN.20
No protein-ligand interaction detected (PLIP)ACT.24: 2 residues within 4Å:- Chain C: D.340
- Ligands: ZN.20
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:D.342
- Salt bridges: C:K.337
ACT.29: 6 residues within 4Å:- Chain D: T.48, F.93, M.140, V.293, V.317
- Ligands: NAD.30
3 PLIP interactions:3 interactions with chain D- Hydrophobic interactions: D:V.293
- Hydrogen bonds: D:T.48, D:T.48
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
NAD.7: 27 residues within 4Å:- Chain A: C.46, R.47, T.48, H.51, C.173, T.177, G.198, L.199, G.200, G.201, V.202, D.222, L.223, K.227, I.268, G.269, H.270, V.291, G.292, V.293, C.316, F.318, R.368
- Ligands: ZN.2, ZN.3, ACT.4, ACT.5
17 PLIP interactions:17 interactions with chain A- Hydrophobic interactions: A:T.177, A:V.202
- Hydrogen bonds: A:R.47, A:H.51, A:L.199, A:L.199, A:G.201, A:V.202, A:D.222, A:L.223, A:I.268, A:V.293, A:C.316, A:F.318
- Salt bridges: A:R.47, A:K.227, A:R.368
NAD.15: 28 residues within 4Å:- Chain B: C.46, R.47, T.48, H.51, C.173, T.177, G.198, L.199, G.200, G.201, V.202, D.222, L.223, K.227, I.268, G.269, H.270, V.291, G.292, V.293, C.316, V.317, F.318, L.361, R.368
- Ligands: ZN.10, ACT.13, ACT.14
19 PLIP interactions:19 interactions with chain B- Hydrophobic interactions: B:T.177, B:V.202
- Hydrogen bonds: B:R.47, B:H.51, B:L.199, B:L.199, B:G.201, B:V.202, B:D.222, B:L.223, B:K.227, B:K.227, B:I.268, B:V.291, B:V.293, B:F.318
- Salt bridges: B:R.47, B:K.227, B:R.368
NAD.25: 33 residues within 4Å:- Chain C: C.46, R.47, T.48, H.51, C.173, T.177, G.198, L.199, G.200, G.201, V.202, G.203, D.222, L.223, N.224, K.227, V.267, I.268, G.269, H.270, T.273, V.291, G.292, V.293, C.316, V.317, F.318, L.361, R.368
- Ligands: ZN.17, ZN.18, ACT.21, ACT.22
19 PLIP interactions:19 interactions with chain C- Hydrophobic interactions: C:T.177, C:V.202
- Hydrogen bonds: C:R.47, C:H.51, C:T.177, C:L.199, C:L.199, C:G.200, C:G.201, C:V.202, C:G.203, C:L.223, C:I.268, C:H.270, C:V.293, C:C.316, C:F.318
- Salt bridges: C:R.47, C:R.368
NAD.30: 27 residues within 4Å:- Chain D: C.46, R.47, T.48, H.51, C.173, T.177, L.199, G.200, G.201, V.202, D.222, L.223, N.224, K.227, I.268, G.269, H.270, V.291, G.292, V.293, C.316, V.317, F.318, R.368
- Ligands: ZN.27, ZN.28, ACT.29
15 PLIP interactions:15 interactions with chain D- Hydrophobic interactions: D:T.177
- Hydrogen bonds: D:R.47, D:H.51, D:L.199, D:L.199, D:G.201, D:V.202, D:G.203, D:L.223, D:I.268, D:V.293, D:C.316, D:F.318
- Salt bridges: D:R.47, D:R.368
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Xie, P. et al., X-ray structure of human class IV sigmasigma alcohol dehydrogenase. Structural basis for substrate specificity. J.Biol.Chem. (1997)
- Release Date
- 1997-03-12
- Peptides
- HUMAN SIGMA ALCOHOL DEHYDROGENASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
DC
BD
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 16 x ZN: ZINC ION(Non-covalent)
- 10 x ACT: ACETATE ION(Non-functional Binders)
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Xie, P. et al., X-ray structure of human class IV sigmasigma alcohol dehydrogenase. Structural basis for substrate specificity. J.Biol.Chem. (1997)
- Release Date
- 1997-03-12
- Peptides
- HUMAN SIGMA ALCOHOL DEHYDROGENASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
DC
BD
C