SMTL ID : 1aih.2 (1 other biounit)

CATALYTIC DOMAIN OF BACTERIOPHAGE HP1 INTEGRASE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: R.40, H.113, R.116, H.139, R.147 7 PLIP interactions: 7 interactions with chain A Water bridges: A:R.116, A:R.147 Salt bridges: A:R.40, A:H.113, A:R.116, A:H.139, A:R.147 SO4.4: 6 residues within 4Å: Chain B: R.116, H.117, H.139, M.144, R.147, Y.148 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:Y.148 Salt bridges: B:H.113, B:R.116, B:H.117, B:H.139, B:R.147 SO4.5: 6 residues within 4Å: Chain B: S.22, R.23, N.24, S.94, N.97, R.101 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:R.23, B:N.24, B:S.94, B:N.97 Salt bridges: B:R.23, B:R.101

3 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 1 residues within 4Å: Chain A: E.103 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.103, A:E.103 MG.3: 2 residues within 4Å: Chain A: Y.92, E.96 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.96 MG.6: 1 residues within 4Å: Chain B: E.93 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hickman, A.B. et al., Molecular organization in site-specific recombination: the catalytic domain of bacteriophage HP1 integrase at 2.7 A resolution. Cell(Cambridge,Mass.) (1997)

Release Date

1997-08-20

Peptides

HP1 INTEGRASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

HP1 INTEGRASE

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