SMTL ID : 1b16.1

ALCOHOL DEHYDROGENASE FROM DROSOPHILA LEBANONENSIS TERNARY COMPLEX WITH NAD-3-PENTANONE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

homo-dimer

Ligands

2 x NAQ: NICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT(Non-covalent)

NAQ.1: 32 residues within 4Å: Chain A: A.12, L.14, G.15, G.16, I.17, D.37, R.38, Y.62, D.63, V.64, G.91, A.92, G.93, I.94, L.95, I.106, I.136, C.137, S.138, V.139, T.140, I.145, Y.151, K.155, P.181, G.182, I.183, T.184, T.186, P.187, L.188, V.189 28 PLIP interactions: 28 interactions with chain A Hydrophobic interactions: A:L.95, A:V.139, A:I.145, A:P.181, A:I.183, A:L.188, A:V.189 Hydrogen bonds: A:A.12, A:L.14, A:G.15, A:G.16, A:I.17, A:D.37, A:D.63, A:V.64, A:G.91, A:G.93, A:R.102, A:S.138, A:T.140, A:Y.151, A:K.155, A:T.184, A:T.184 Water bridges: A:G.18, A:D.37, A:R.38, A:P.187 NAQ.2: 31 residues within 4Å: Chain B: A.12, L.14, G.15, G.16, I.17, D.37, R.38, Y.62, D.63, V.64, G.91, A.92, G.93, I.94, L.95, I.106, I.136, C.137, S.138, V.139, T.140, I.145, Y.151, K.155, P.181, G.182, I.183, T.184, T.186, L.188, V.189 26 PLIP interactions: 26 interactions with chain B Hydrophobic interactions: B:L.95, B:V.139, B:I.145, B:Y.151, B:P.181, B:I.183, B:L.188, B:V.189 Hydrogen bonds: B:A.12, B:L.14, B:G.15, B:G.16, B:I.17, B:R.38, B:D.63, B:V.64, B:G.91, B:G.93, B:S.138, B:Y.151, B:K.155, B:T.184, B:T.184, B:T.184, B:T.186 Water bridges: B:G.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Benach, J. et al., The catalytic reaction and inhibition mechanism of Drosophila alcohol dehydrogenase: observation of an enzyme-bound NAD-ketone adduct at 1.4 A resolution by X-ray crystallography. J.Mol.Biol. (1999)

Release Date

1999-11-29

Peptides

PROTEIN (ALCOHOL DEHYDROGENASE): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PROTEIN (ALCOHOL DEHYDROGENASE)

Related Entries With Identical Sequence