- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- hetero-8-8-mer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 8 x CAP: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE(Non-covalent)
CAP.2: 22 residues within 4Å:- Chain A: T.182, K.184, K.186, K.210, D.212, E.213, H.302, R.303, H.335, K.342, L.343, S.387, G.388, G.389, Q.409, G.411, G.412
- Chain K: E.69, T.74, W.75, N.132
- Ligands: MG.1
27 PLIP interactions:25 interactions with chain A, 2 interactions with chain K- Hydrogen bonds: A:K.184, A:D.212, A:S.387, A:G.388, A:G.389, A:G.411, A:G.412, K:T.74, K:N.132
- Water bridges: A:T.182, A:T.182, A:K.186, A:K.186, A:H.335, A:G.337, A:K.342, A:K.342, A:I.390, A:I.390, A:I.390
- Salt bridges: A:K.184, A:K.184, A:K.186, A:R.303, A:H.335, A:K.342, A:K.342
CAP.4: 22 residues within 4Å:- Chain C: T.182, K.184, K.186, K.210, D.212, E.213, H.302, R.303, H.335, K.342, L.343, S.387, G.388, G.389, Q.409, G.411, G.412
- Chain I: E.69, T.74, W.75, N.132
- Ligands: MG.3
28 PLIP interactions:26 interactions with chain C, 2 interactions with chain I- Hydrogen bonds: C:T.182, C:K.184, C:D.212, C:G.388, C:G.389, C:G.411, C:G.412, I:T.74, I:N.132
- Water bridges: C:T.182, C:T.182, C:K.186, C:K.186, C:G.337, C:K.342, C:K.342, C:S.387, C:G.388, C:I.390, C:I.390, C:I.390
- Salt bridges: C:K.184, C:K.184, C:K.186, C:R.303, C:H.335, C:K.342, C:K.342
CAP.6: 22 residues within 4Å:- Chain E: T.182, K.184, K.186, K.210, D.212, E.213, H.302, R.303, H.335, K.342, L.343, S.387, G.388, G.389, Q.409, G.411, G.412
- Chain O: E.69, T.74, W.75, N.132
- Ligands: MG.5
26 PLIP interactions:22 interactions with chain E, 4 interactions with chain O- Hydrogen bonds: E:T.182, E:K.184, E:D.212, E:G.388, E:G.389, E:G.411, E:G.412, O:T.74, O:N.132
- Water bridges: E:T.182, E:T.182, E:K.342, E:K.342, E:S.387, E:I.390, E:I.390, E:I.390, O:E.69, O:E.69
- Salt bridges: E:K.184, E:K.184, E:K.186, E:R.303, E:H.335, E:K.342, E:K.342
CAP.8: 22 residues within 4Å:- Chain G: T.182, K.184, K.186, K.210, D.212, E.213, H.302, R.303, H.335, K.342, L.343, S.387, G.388, G.389, Q.409, G.411, G.412
- Chain M: E.69, T.74, W.75, N.132
- Ligands: MG.7
26 PLIP interactions:23 interactions with chain G, 3 interactions with chain M- Hydrogen bonds: G:K.184, G:D.212, G:S.387, G:G.388, G:G.389, G:G.411, G:G.412, M:T.74, M:N.132
- Water bridges: G:T.182, G:T.182, G:K.186, G:K.186, G:K.186, G:G.388, G:I.390, G:I.390, G:I.390, M:E.69
- Salt bridges: G:K.184, G:K.184, G:K.186, G:R.303, G:H.335, G:K.342, G:K.342
CAP.10: 22 residues within 4Å:- Chain C: E.69, T.74, W.75, N.132
- Chain I: T.182, K.184, K.186, K.210, D.212, E.213, H.302, R.303, H.335, K.342, L.343, S.387, G.388, G.389, Q.409, G.411, G.412
- Ligands: MG.9
27 PLIP interactions:25 interactions with chain I, 2 interactions with chain C- Hydrogen bonds: I:K.184, I:D.212, I:S.387, I:G.388, I:G.389, I:G.411, I:G.412, C:T.74, C:N.132
- Water bridges: I:T.182, I:T.182, I:K.186, I:K.186, I:H.335, I:G.337, I:K.342, I:K.342, I:I.390, I:I.390, I:I.390
- Salt bridges: I:K.184, I:K.184, I:K.186, I:R.303, I:H.335, I:K.342, I:K.342
CAP.12: 22 residues within 4Å:- Chain A: E.69, T.74, W.75, N.132
- Chain K: T.182, K.184, K.186, K.210, D.212, E.213, H.302, R.303, H.335, K.342, L.343, S.387, G.388, G.389, Q.409, G.411, G.412
- Ligands: MG.11
28 PLIP interactions:26 interactions with chain K, 2 interactions with chain A- Hydrogen bonds: K:T.182, K:K.184, K:D.212, K:G.388, K:G.389, K:G.411, K:G.412, A:T.74, A:N.132
- Water bridges: K:T.182, K:T.182, K:K.186, K:K.186, K:G.337, K:K.342, K:K.342, K:S.387, K:G.388, K:I.390, K:I.390, K:I.390
- Salt bridges: K:K.184, K:K.184, K:K.186, K:R.303, K:H.335, K:K.342, K:K.342
CAP.14: 22 residues within 4Å:- Chain G: E.69, T.74, W.75, N.132
- Chain M: T.182, K.184, K.186, K.210, D.212, E.213, H.302, R.303, H.335, K.342, L.343, S.387, G.388, G.389, Q.409, G.411, G.412
- Ligands: MG.13
26 PLIP interactions:22 interactions with chain M, 4 interactions with chain G- Hydrogen bonds: M:T.182, M:K.184, M:D.212, M:G.388, M:G.389, M:G.411, M:G.412, G:T.74, G:N.132
- Water bridges: M:T.182, M:T.182, M:K.342, M:K.342, M:S.387, M:I.390, M:I.390, M:I.390, G:E.69, G:E.69
- Salt bridges: M:K.184, M:K.184, M:K.186, M:R.303, M:H.335, M:K.342, M:K.342
CAP.16: 22 residues within 4Å:- Chain E: E.69, T.74, W.75, N.132
- Chain O: T.182, K.184, K.186, K.210, D.212, E.213, H.302, R.303, H.335, K.342, L.343, S.387, G.388, G.389, Q.409, G.411, G.412
- Ligands: MG.15
27 PLIP interactions:24 interactions with chain O, 3 interactions with chain E- Hydrogen bonds: O:T.182, O:K.184, O:D.212, O:S.387, O:G.388, O:G.389, O:G.411, O:G.412, E:T.74, E:N.132
- Water bridges: O:T.182, O:T.182, O:K.186, O:K.186, O:K.186, O:G.388, O:I.390, O:I.390, O:I.390, E:E.69
- Salt bridges: O:K.184, O:K.184, O:K.186, O:R.303, O:H.335, O:K.342, O:K.342
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sugawara, H. et al., Crystal structure of carboxylase reaction-oriented ribulose 1, 5-bisphosphate carboxylase/oxygenase from a thermophilic red alga, Galdieria partita. J.Biol.Chem. (1999)
- Release Date
- 1999-09-27
- Peptides
- PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE): ACEGIKMO
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE): BDFHJLNP - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CE
EG
GI
AK
CM
EO
GB
SD
UF
WH
YJ
SL
UN
WP
Y
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- hetero-8-8-mer
- Ligands
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 8 x CAP: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sugawara, H. et al., Crystal structure of carboxylase reaction-oriented ribulose 1, 5-bisphosphate carboxylase/oxygenase from a thermophilic red alga, Galdieria partita. J.Biol.Chem. (1999)
- Release Date
- 1999-09-27
- Peptides
- PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE): ACEGIKMO
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE): BDFHJLNP - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CE
EG
GI
AK
CM
EO
GB
SD
UF
WH
YJ
SL
UN
WP
Y