SMTL ID : 1c1j.1 (1 other biounit)

STRUCTURE OF CADMIUM-SUBSTITUTED PHOSPHOLIPASE A2 FROM AGKISTRONDON HALYS PALLAS AT 2.8 ANGSTROMS RESOLUTION

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

1 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 6 residues within 4Å: Chain A: Y.21, A.22, F.23, G.29, S.30 Chain B: I.113 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.21 Hydrogen bonds: A:S.30

4 x CD: CADMIUM ION(Non-covalent)

CD.2: 3 residues within 4Å: Chain A: G.29, H.47, D.48 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.47, A:D.48, H2O.1, H2O.1 CD.3: 3 residues within 4Å: Chain A: G.25, Y.110, D.112 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:G.25 CD.4: 2 residues within 4Å: Chain B: H.47, D.48 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.47, H2O.1, H2O.2 CD.5: 3 residues within 4Å: Chain B: G.25, Y.110, D.112 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, H.-l. et al., Structure of Cadmium-substituted Phospholipase A2 from Agkistrodon halys Pallas at 2.8 Angstroms Resolution. Protein Pept.Lett. (1999)

Release Date

2002-07-05

Peptides

BASIC PHOSPHOLIPASE A2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

BASIC PHOSPHOLIPASE A2

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