SMTL ID : 1cov.2 (3 other biounits)

COXSACKIEVIRUS B3 COAT PROTEIN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.50 Å

Oligo State

hetero-5-5-5-5-mer

Ligands

5 x PLM: PALMITIC ACID(Non-covalent)

PLM.1: 10 residues within 4Å: Chain A: I.92, P.94, R.95, L.114, L.116, Y.143, M.178, N.211, M.213, L.216 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.92, A:I.92, A:L.114, A:L.116, A:Y.143, A:L.216 Hydrogen bonds: A:N.211 Salt bridges: A:R.95 PLM.3: 10 residues within 4Å: Chain E: I.92, P.94, R.95, L.114, L.116, Y.143, M.178, N.211, M.213, L.216 8 PLIP interactions: 8 interactions with chain E Hydrophobic interactions: E:I.92, E:I.92, E:L.114, E:L.116, E:Y.143, E:L.216 Hydrogen bonds: E:N.211 Salt bridges: E:R.95 PLM.5: 10 residues within 4Å: Chain I: I.92, P.94, R.95, L.114, L.116, Y.143, M.178, N.211, M.213, L.216 8 PLIP interactions: 8 interactions with chain I Hydrophobic interactions: I:I.92, I:I.92, I:L.114, I:L.116, I:Y.143, I:L.216 Hydrogen bonds: I:N.211 Salt bridges: I:R.95 PLM.7: 10 residues within 4Å: Chain M: I.92, P.94, R.95, L.114, L.116, Y.143, M.178, N.211, M.213, L.216 8 PLIP interactions: 8 interactions with chain M Hydrophobic interactions: M:I.92, M:I.92, M:L.114, M:L.116, M:Y.143, M:L.216 Hydrogen bonds: M:N.211 Salt bridges: M:R.95 PLM.9: 10 residues within 4Å: Chain Q: I.92, P.94, R.95, L.114, L.116, Y.143, M.178, N.211, M.213, L.216 8 PLIP interactions: 8 interactions with chain Q Hydrophobic interactions: Q:I.92, Q:I.92, Q:L.114, Q:L.116, Q:Y.143, Q:L.216 Hydrogen bonds: Q:N.211 Salt bridges: Q:R.95

5 x MYR: MYRISTIC ACID(Covalent)

MYR.2: 9 residues within 4Å: Chain D: G.1, A.2, I.29, Y.31 Chain H: T.27, Y.31 Chain O: L.2 Ligands: MYR.4, MYR.10 4 PLIP interactions: 2 interactions with chain D, 1 interactions with chain O, 1 interactions with chain H Hydrophobic interactions: D:Y.31, D:Y.31, O:L.2 Hydrogen bonds: H:T.27 MYR.4: 9 residues within 4Å: Chain H: G.1, A.2, I.29, Y.31 Chain L: T.27, Y.31 Chain S: L.2 Ligands: MYR.2, MYR.6 3 PLIP interactions: 2 interactions with chain H, 1 interactions with chain S Hydrophobic interactions: H:Y.31, H:Y.31, S:L.2 MYR.6: 9 residues within 4Å: Chain C: L.2 Chain L: G.1, A.2, I.29, Y.31 Chain P: T.27, Y.31 Ligands: MYR.4, MYR.8 3 PLIP interactions: 2 interactions with chain L, 1 interactions with chain C Hydrophobic interactions: L:Y.31, L:Y.31, C:L.2 MYR.8: 9 residues within 4Å: Chain G: L.2 Chain P: G.1, A.2, I.29, Y.31 Chain T: T.27, Y.31 Ligands: MYR.6, MYR.10 4 PLIP interactions: 1 interactions with chain G, 2 interactions with chain P, 1 interactions with chain T Hydrophobic interactions: G:L.2, P:Y.31, P:Y.31 Hydrogen bonds: T:T.27 MYR.10: 9 residues within 4Å: Chain D: T.27, Y.31 Chain K: L.2 Chain T: G.1, A.2, I.29, Y.31 Ligands: MYR.2, MYR.8 4 PLIP interactions: 1 interactions with chain K, 2 interactions with chain T, 1 interactions with chain D Hydrophobic interactions: K:L.2, T:Y.31, T:Y.31 Hydrogen bonds: D:T.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Muckelbauer, J.K. et al., Structure determination of coxsackievirus B3 to 3.5 A resolution. Acta Crystallogr.,Sect.D (1995)

Release Date

1996-03-08

Peptides

COXSACKIEVIRUS COAT PROTEIN: AEIMQ
COXSACKIEVIRUS COAT PROTEIN: BFJNR
COXSACKIEVIRUS COAT PROTEIN: CGKOS
COXSACKIEVIRUS COAT PROTEIN: DHLPT

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

E
1

I
1

M
1

Q
1

B
2

F
2

J
2

N
2

R
2

C
3

G
3

K
3

O
3

S
3

D
4

H
4

L
4

P
4

T
4

COXSACKIEVIRUS COAT PROTEIN

COXSACKIEVIRUS COAT PROTEIN

COXSACKIEVIRUS COAT PROTEIN

COXSACKIEVIRUS COAT PROTEIN

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