SMTL ID : 1cov.3 (3 other biounits)

COXSACKIEVIRUS B3 COAT PROTEIN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.50 Å

Oligo State

hetero-6-6-6-6-mer

Ligands

6 x PLM: PALMITIC ACID(Non-covalent)

PLM.1: 10 residues within 4Å: Chain A: I.92, P.94, R.95, L.114, L.116, Y.143, M.178, N.211, M.213, L.216 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.92, A:I.92, A:L.114, A:L.116, A:Y.143, A:L.216 Hydrogen bonds: A:N.211 Salt bridges: A:R.95 PLM.3: 10 residues within 4Å: Chain E: I.92, P.94, R.95, L.114, L.116, Y.143, M.178, N.211, M.213, L.216 8 PLIP interactions: 8 interactions with chain E Hydrophobic interactions: E:I.92, E:I.92, E:L.114, E:L.116, E:Y.143, E:L.216 Hydrogen bonds: E:N.211 Salt bridges: E:R.95 PLM.5: 10 residues within 4Å: Chain I: I.92, P.94, R.95, L.114, L.116, Y.143, M.178, N.211, M.213, L.216 8 PLIP interactions: 8 interactions with chain I Hydrophobic interactions: I:I.92, I:I.92, I:L.114, I:L.116, I:Y.143, I:L.216 Hydrogen bonds: I:N.211 Salt bridges: I:R.95 PLM.7: 10 residues within 4Å: Chain M: I.92, P.94, R.95, L.114, L.116, Y.143, M.178, N.211, M.213, L.216 8 PLIP interactions: 8 interactions with chain M Hydrophobic interactions: M:I.92, M:I.92, M:L.114, M:L.116, M:Y.143, M:L.216 Hydrogen bonds: M:N.211 Salt bridges: M:R.95 PLM.9: 10 residues within 4Å: Chain Q: I.92, P.94, R.95, L.114, L.116, Y.143, M.178, N.211, M.213, L.216 8 PLIP interactions: 8 interactions with chain Q Hydrophobic interactions: Q:I.92, Q:I.92, Q:L.114, Q:L.116, Q:Y.143, Q:L.216 Hydrogen bonds: Q:N.211 Salt bridges: Q:R.95 PLM.11: 10 residues within 4Å: Chain U: I.92, P.94, R.95, L.114, L.116, Y.143, M.178, N.211, M.213, L.216 8 PLIP interactions: 8 interactions with chain U Hydrophobic interactions: U:I.92, U:I.92, U:L.114, U:L.116, U:Y.143, U:L.216 Hydrogen bonds: U:N.211 Salt bridges: U:R.95

6 x MYR: MYRISTIC ACID(Covalent)

MYR.2: 7 residues within 4Å: Chain D: G.1, A.2, I.29, Y.31 Chain H: T.27, Y.31 Ligands: MYR.4 3 PLIP interactions: 1 interactions with chain H, 2 interactions with chain D Hydrogen bonds: H:T.27 Hydrophobic interactions: D:Y.31, D:Y.31 MYR.4: 5 residues within 4Å: Chain H: G.1, A.2, I.29, Y.31 Ligands: MYR.2 2 PLIP interactions: 2 interactions with chain H Hydrophobic interactions: H:Y.31, H:Y.31 MYR.6: 5 residues within 4Å: Chain L: G.1, A.2, I.29, Y.31 Ligands: MYR.8 2 PLIP interactions: 2 interactions with chain L Hydrophobic interactions: L:Y.31, L:Y.31 MYR.8: 7 residues within 4Å: Chain L: T.27, Y.31 Chain P: G.1, A.2, I.29, Y.31 Ligands: MYR.6 2 PLIP interactions: 2 interactions with chain P Hydrophobic interactions: P:Y.31, P:Y.31 MYR.10: 7 residues within 4Å: Chain T: G.1, A.2, I.29, Y.31 Chain X: T.27, Y.31 Ligands: MYR.12 3 PLIP interactions: 2 interactions with chain T, 1 interactions with chain X Hydrophobic interactions: T:Y.31, T:Y.31 Hydrogen bonds: X:T.27 MYR.12: 5 residues within 4Å: Chain X: G.1, A.2, I.29, Y.31 Ligands: MYR.10 2 PLIP interactions: 2 interactions with chain X Hydrophobic interactions: X:Y.31, X:Y.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Muckelbauer, J.K. et al., Structure determination of coxsackievirus B3 to 3.5 A resolution. Acta Crystallogr.,Sect.D (1995)

Release Date

1996-03-08

Peptides

COXSACKIEVIRUS COAT PROTEIN: AEIMQU
COXSACKIEVIRUS COAT PROTEIN: BFJNRV
COXSACKIEVIRUS COAT PROTEIN: CGKOSW
COXSACKIEVIRUS COAT PROTEIN: DHLPTX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

E
1

I
1

M
1

Q
1

U
1

B
2

F
2

J
2

N
2

R
2

V
2

C
3

G
3

K
3

O
3

S
3

W
3

D
4

H
4

L
4

P
4

T
4

X
4

COXSACKIEVIRUS COAT PROTEIN

COXSACKIEVIRUS COAT PROTEIN

COXSACKIEVIRUS COAT PROTEIN

COXSACKIEVIRUS COAT PROTEIN

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