SMTL ID : 1cqd.4 (3 other biounits)

THE 2.1 ANGSTROM STRUCTURE OF A CYSTEINE PROTEASE WITH PROLINE SPECIFICITY FROM GINGER RHIZOME, ZINGIBER OFFICINALE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x NAG- FUC- NAG: alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-FUC-NAG.1: 3 residues within 4Å: Chain A: I.97, N.99, T.101 No protein-ligand interaction detected (PLIP)

1 x THJ: THIOSULFATE(Non-covalent)

THJ.2: 6 residues within 4Å: Chain A: Q.21, G.25, S.26, C.27, N.160, H.161 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.21, A:C.24, A:C.27 Salt bridges: A:H.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Choi, K.H. et al., The 2.1 A structure of a cysteine protease with proline specificity from ginger rhizome, Zingiber officinale. Biochemistry (1999)

Release Date

1999-09-28

Peptides

PROTEIN (PROTEASE II): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

PROTEIN (PROTEASE II)

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