SMTL ID : 1d7j.3 (3 other biounits)

FKBP COMPLEXED WITH 4-HYDROXY-2-BUTANONE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

2 x NH4: AMMONIUM ION(Non-functional Binders)

NH4.1: 7 residues within 4Å: Chain A: Y.82, T.85, G.86 Chain B: Y.82, T.85, G.86 Ligands: NH4.4 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:T.85, B:Y.82 NH4.4: 7 residues within 4Å: Chain A: Y.82, T.85, G.86 Chain B: Y.82, T.85, G.86 Ligands: NH4.1 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:T.85, B:Y.82

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 7 residues within 4Å: Chain A: G.83, A.84, T.85 Chain B: G.83, A.84, T.85 Ligands: SO4.5 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:A.84, A:T.85, B:A.84, B:T.85 SO4.5: 7 residues within 4Å: Chain A: G.83, A.84, T.85 Chain B: G.83, A.84, T.85 Ligands: SO4.2 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:A.84, A:T.85, B:A.84, B:T.85

2 x BUQ: 4-HYDROXY-2-BUTANONE(Non-covalent)

BUQ.3: 6 residues within 4Å: Chain A: Y.26, D.37, V.55, I.56, W.59, F.99 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.56, A:W.59, A:F.99 Hydrogen bonds: A:D.37, A:D.37, A:I.56, A:Y.82 BUQ.6: 6 residues within 4Å: Chain B: Y.26, D.37, V.55, I.56, W.59, F.99 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:I.56, B:W.59, B:F.99 Hydrogen bonds: B:D.37, B:I.56 Water bridges: B:Y.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burkhard, P. et al., X-ray structures of small ligand-FKBP complexes provide an estimate for hydrophobic interaction energies. J.Mol.Biol. (2000)

Release Date

1999-10-21

Peptides

PROTEIN (FK506-BINDING PROTEIN): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PROTEIN (FK506-BINDING PROTEIN)

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