SMTL ID : 1dbf.1

CHORISMATE MUTASE FROM BACILLUS SUBTILIS AT 1.30 ANGSTROM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

homo-trimer

Ligands

9 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 10 residues within 4Å: Chain A: F.57, A.59, R.63, V.73, T.74, C.75 Chain B: R.7, E.78, R.90 Ligands: GOL.11 6 PLIP interactions: 3 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:T.74, A:C.75, B:E.78 Salt bridges: A:R.63, B:R.7, B:R.90 SO4.2: 4 residues within 4Å: Chain A: R.116, P.117, D.118, L.119 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.118, A:D.118, A:L.119 Water bridges: A:H.106 Salt bridges: A:R.116 SO4.3: 1 residues within 4Å: Chain A: K.60 4 PLIP interactions: 4 interactions with chain A Water bridges: A:E.17, A:K.60, A:K.60 Salt bridges: A:K.60 SO4.4: 2 residues within 4Å: Chain A: E.13, K.111 2 PLIP interactions: 2 interactions with chain A Water bridges: A:K.111 Salt bridges: A:K.111 SO4.8: 10 residues within 4Å: Chain B: F.57, A.59, R.63, V.73, T.74, C.75 Chain C: R.7, E.78, R.90 Ligands: GOL.14 6 PLIP interactions: 3 interactions with chain C, 3 interactions with chain B Hydrogen bonds: C:E.78, B:T.74, B:C.75 Salt bridges: C:R.7, C:R.90, B:R.63 SO4.9: 2 residues within 4Å: Chain B: E.17, K.60 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:E.17 Water bridges: B:K.60, B:K.60, B:K.60 Salt bridges: B:K.60 SO4.10: 2 residues within 4Å: Chain B: T.97, D.98 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.98, B:V.99 SO4.12: 10 residues within 4Å: Chain A: R.7, E.78, R.90 Chain C: F.57, A.59, R.63, V.73, T.74, C.75 Ligands: GOL.5 5 PLIP interactions: 2 interactions with chain C, 3 interactions with chain A Hydrogen bonds: C:C.75, A:E.78 Salt bridges: C:R.63, A:R.7, A:R.90 SO4.13: 1 residues within 4Å: Chain C: K.86 1 PLIP interactions: 1 interactions with chain C Salt bridges: C:K.86

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 7 residues within 4Å: Chain A: R.7, R.90, Y.108, L.115, P.117 Chain C: R.63 Ligands: SO4.12 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain C Hydrogen bonds: A:R.7, A:R.7, A:R.90, A:Y.108, A:Y.108, C:R.63 GOL.6: 3 residues within 4Å: Chain A: K.25, E.64, L.65 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.25, A:E.64 Water bridges: A:K.25, A:E.64, A:E.64, A:E.64, A:S.66 GOL.7: 3 residues within 4Å: Chain A: Q.103, L.121, T.122 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.103, A:T.122 Water bridges: A:L.121, A:L.121, A:T.122 GOL.11: 6 residues within 4Å: Chain A: R.63 Chain B: R.7, R.90, Y.108, L.115 Ligands: SO4.1 6 PLIP interactions: 5 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:R.7, B:R.7, B:R.90, B:Y.108, B:Y.108, A:R.63 GOL.14: 7 residues within 4Å: Chain B: R.63 Chain C: R.7, R.90, Y.108, L.115, P.117 Ligands: SO4.8 6 PLIP interactions: 5 interactions with chain C, 1 interactions with chain B Hydrogen bonds: C:R.7, C:R.7, C:R.90, C:Y.108, C:Y.108, B:R.63

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ladner, J.E. et al., The 1.30 A resolution structure of the Bacillus subtilis chorismate mutase catalytic homotrimer. Acta Crystallogr.,Sect.D (2000)

Release Date

2000-06-07

Peptides

PROTEIN (CHORISMATE MUTASE): ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

PROTEIN (CHORISMATE MUTASE)

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