SMTL ID : 1dea.1 (2 other biounits)

STRUCTURE AND CATALYTIC MECHANISM OF GLUCOSAMINE 6-PHOSPHATE DEAMINASE FROM ESCHERICHIA COLI AT 2.1 ANGSTROMS RESOLUTION

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-hexamer

Ligands

12 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: M.1 Chain E: S.151, S.152, R.158, K.160 7 PLIP interactions: 3 interactions with chain A, 4 interactions with chain E Hydrogen bonds: A:M.1, E:S.152 Water bridges: A:M.1, A:A.235, E:K.160 Salt bridges: E:R.158, E:K.160 PO4.2: 5 residues within 4Å: Chain A: G.42, G.43, T.44, R.172, K.208 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:G.43, A:T.44 Water bridges: A:N.170, A:R.172, A:R.172, A:R.172, A:K.208 Salt bridges: A:R.172, A:K.208 PO4.3: 5 residues within 4Å: Chain B: M.1 Chain D: S.151, S.152, R.158, K.160 5 PLIP interactions: 4 interactions with chain D, 1 interactions with chain B Hydrogen bonds: D:S.152 Water bridges: D:K.160, B:M.1 Salt bridges: D:R.158, D:K.160 PO4.4: 5 residues within 4Å: Chain B: G.42, G.43, T.44, R.172, K.208 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:G.43, B:T.44, B:T.44 Water bridges: B:R.172, B:R.172, B:K.208, B:K.208 Salt bridges: B:R.172, B:K.208 PO4.5: 5 residues within 4Å: Chain A: S.151, S.152, R.158, K.160 Chain C: M.1 7 PLIP interactions: 4 interactions with chain A, 3 interactions with chain C Hydrogen bonds: A:S.152, C:M.1 Water bridges: A:K.160, C:M.1, C:A.235 Salt bridges: A:R.158, A:K.160 PO4.6: 5 residues within 4Å: Chain C: G.42, G.43, T.44, R.172, K.208 9 PLIP interactions: 9 interactions with chain C Hydrogen bonds: C:G.43, C:T.44 Water bridges: C:N.170, C:R.172, C:R.172, C:R.172, C:K.208 Salt bridges: C:R.172, C:K.208 PO4.7: 5 residues within 4Å: Chain D: M.1 Chain F: S.151, S.152, R.158, K.160 5 PLIP interactions: 4 interactions with chain F, 1 interactions with chain D Hydrogen bonds: F:S.152 Water bridges: F:K.160, D:M.1 Salt bridges: F:R.158, F:K.160 PO4.8: 5 residues within 4Å: Chain D: G.42, G.43, T.44, R.172, K.208 9 PLIP interactions: 9 interactions with chain D Hydrogen bonds: D:G.43, D:T.44, D:T.44 Water bridges: D:R.172, D:R.172, D:K.208, D:K.208 Salt bridges: D:R.172, D:K.208 PO4.9: 5 residues within 4Å: Chain C: S.151, S.152, R.158, K.160 Chain E: M.1 7 PLIP interactions: 3 interactions with chain E, 4 interactions with chain C Hydrogen bonds: E:M.1, C:S.152 Water bridges: E:M.1, E:A.235, C:K.160 Salt bridges: C:R.158, C:K.160 PO4.10: 5 residues within 4Å: Chain E: G.42, G.43, T.44, R.172, K.208 9 PLIP interactions: 9 interactions with chain E Hydrogen bonds: E:G.43, E:T.44 Water bridges: E:N.170, E:R.172, E:R.172, E:R.172, E:K.208 Salt bridges: E:R.172, E:K.208 PO4.11: 5 residues within 4Å: Chain B: S.151, S.152, R.158, K.160 Chain F: M.1 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain F Hydrogen bonds: B:S.152 Water bridges: B:K.160, F:M.1 Salt bridges: B:R.158, B:K.160 PO4.12: 5 residues within 4Å: Chain F: G.42, G.43, T.44, R.172, K.208 9 PLIP interactions: 9 interactions with chain F Hydrogen bonds: F:G.43, F:T.44, F:T.44 Water bridges: F:R.172, F:R.172, F:K.208, F:K.208 Salt bridges: F:R.172, F:K.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oliva, G. et al., Structure and catalytic mechanism of glucosamine 6-phosphate deaminase from Escherichia coli at 2.1 A resolution. Structure (1995)

Release Date

1996-01-29

Peptides

GLUCOSAMINE 6-PHOSPHATE DEAMINASE: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

GLUCOSAMINE 6-PHOSPHATE DEAMINASE

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