SMTL ID : 1dfv.3 (2 other biounits)

CRYSTAL STRUCTURE OF HUMAN NEUTROPHIL GELATINASE ASSOCIATED LIPOCALIN MONOMER

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: K.59, N.65 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:K.59 Hydrogen bonds: A:N.65 NAG.3: 2 residues within 4Å: Chain B: K.59, N.65 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:K.59 Hydrogen bonds: B:N.65

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: R.81, Y.106, K.125, K.134 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.81 Water bridges: A:K.134 Salt bridges: A:K.125, A:K.134 SO4.4: 4 residues within 4Å: Chain B: R.81, Y.106, K.125, K.134 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:R.81, B:Y.106 Water bridges: B:K.134 Salt bridges: B:K.125, B:K.134

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Goetz, D.H. et al., Ligand preference inferred from the structure of neutrophil gelatinase associated lipocalin. Biochemistry (2000)

Release Date

2000-03-06

Peptides

HUMAN NEUTROPHIL GELATINASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

HUMAN NEUTROPHIL GELATINASE

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