- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x SR: STRONTIUM ION(Non-functional Binders)
- 3 x DUD: DEOXYURIDINE-5'-DIPHOSPHATE(Non-covalent)
DUD.2: 15 residues within 4Å:- Chain A: N.67, G.68, G.69, I.70, I.71, D.72, Y.75, I.79, Q.80, I.82
- Chain C: K.56, S.57, S.58, K.98
- Ligands: SR.1
24 PLIP interactions:14 interactions with chain C, 10 interactions with chain A- Hydrogen bonds: C:S.57, C:S.58, A:G.69, A:I.70, A:D.72, A:Q.80, A:Q.80
- Water bridges: C:K.56, C:K.56, C:S.57, C:S.57, C:S.57, C:K.98, C:K.98, C:K.98, C:K.98, A:Y.75, A:Y.75, A:I.82
- Salt bridges: C:K.56, C:K.98, C:K.98
- Hydrophobic interactions: A:I.71, A:Y.75
DUD.4: 15 residues within 4Å:- Chain A: K.56, S.57, S.58, K.98
- Chain B: N.67, G.68, G.69, I.70, I.71, D.72, Y.75, I.79, Q.80, I.82
- Ligands: SR.3
22 PLIP interactions:8 interactions with chain B, 14 interactions with chain A- Hydrophobic interactions: B:I.71, B:Y.75
- Hydrogen bonds: B:G.69, B:I.70, B:D.72, B:Q.80, B:Q.80, A:S.57, A:S.58
- Water bridges: B:I.82, A:K.56, A:K.56, A:S.57, A:S.57, A:S.57, A:K.98, A:K.98, A:K.98, A:K.98
- Salt bridges: A:K.56, A:K.98, A:K.98
DUD.6: 15 residues within 4Å:- Chain B: K.56, S.57, S.58, K.98
- Chain C: N.67, G.68, G.69, I.70, I.71, D.72, Y.75, I.79, Q.80, I.82
- Ligands: SR.5
24 PLIP interactions:14 interactions with chain B, 10 interactions with chain C- Hydrogen bonds: B:S.57, B:S.58, C:G.69, C:I.70, C:D.72, C:Q.80, C:Q.80
- Water bridges: B:K.56, B:K.56, B:S.57, B:S.57, B:S.57, B:K.98, B:K.98, B:K.98, B:K.98, C:Y.75, C:Y.75, C:I.82
- Salt bridges: B:K.56, B:K.98, B:K.98
- Hydrophobic interactions: C:I.71, C:Y.75
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dauter, Z. et al., Crystal structure of dUTPase from equine infectious anaemia virus; active site metal binding in a substrate analogue complex. J.Mol.Biol. (1999)
- Release Date
- 1998-06-03
- Peptides
- DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x SR: STRONTIUM ION(Non-functional Binders)
- 3 x DUD: DEOXYURIDINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dauter, Z. et al., Crystal structure of dUTPase from equine infectious anaemia virus; active site metal binding in a substrate analogue complex. J.Mol.Biol. (1999)
- Release Date
- 1998-06-03
- Peptides
- DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A