SMTL ID : 1dvf.2 (1 other biounit)

IDIOTOPIC ANTIBODY D1.3 FV FRAGMENT-ANTIIDIOTOPIC ANTIBODY E5.2 FV FRAGMENT COMPLEX

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-2-2-2-2-mer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain B: H.86, D.88 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.86, B:D.88, B:D.88 ZN.2: 7 residues within 4Å: Chain C: D.1, I.2, Q.3 Chain G: D.1, I.2, Q.3 Ligands: ZN.5 2 PLIP interactions: 1 interactions with chain G, 1 interactions with chain C Metal complexes: G:D.1, C:D.1 ZN.3: 3 residues within 4Å: Chain B: D.100 Chain D: H.33, D.52 4 PLIP interactions: 2 interactions with chain D, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: D:H.33, D:D.52, B:D.100, H2O.2 ZN.4: 2 residues within 4Å: Chain F: H.86, D.88 3 PLIP interactions: 3 interactions with chain F Metal complexes: F:H.86, F:D.88, F:D.88 ZN.5: 7 residues within 4Å: Chain C: D.1, I.2, Q.3 Chain G: D.1, I.2, Q.3 Ligands: ZN.2 2 PLIP interactions: 1 interactions with chain G, 1 interactions with chain C Metal complexes: G:D.1, C:D.1 ZN.6: 3 residues within 4Å: Chain F: D.100 Chain H: H.33, D.52 4 PLIP interactions: 2 interactions with chain H, 1 interactions with chain F, 1 Ligand-Water interactions Metal complexes: H:H.33, H:D.52, F:D.100, H2O.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Braden, B.C. et al., Crystal structure of an Fv-Fv idiotope-anti-idiotope complex at 1.9 A resolution. J.Mol.Biol. (1996)

Release Date

1996-08-17

Peptides

FV D1.3: AE
FV D1.3: BF
FV E5.2: CG
FV E5.2: DH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
A

B
B

F
B

C
C

G
C

D
D

H
D

FV D1.3

FV D1.3

FV E5.2

FV E5.2

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