SMTL ID : 1f4y.1

CRYSTAL STRUCTURE OF AN ANTI-CARBOHYDRATE ANTIBODY DIRECTED AGAINST VIBRIO CHOLERAE O1 IN COMPLEX WITH ANTIGEN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZD0- ZCZ: 4,6-dideoxy-4-{[(2R)-2,4-dihydroxybutanoyl]amino}-2-O-methyl-alpha-D-mannopyranose-(1-2)-methyl 4,6-dideoxy-4-{[(2R)-2,4-dihydroxybutanoyl]amino}-alpha-D-mannopyranoside(Non-covalent)

ZD0-ZCZ.1: 11 residues within 4Å: Chain A: Y.34, W.93, S.95, G.96 Chain B: T.31, Y.32, D.33, F.50, H.99, Y.101, A.102 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:Y.101, B:A.102 Hydrogen bonds: B:T.31, B:D.33, B:D.33, B:D.33, B:H.99, B:Y.101, B:A.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Villeneuve, S. et al., Crystal structure of an anti-carbohydrate antibody directed against Vibrio cholerae O1 in complex with antigen: molecular basis for serotype specificity. Proc.Natl.Acad.Sci.USA (2000)

Release Date

2000-08-02

Peptides

ANTIBODY S-20-4, FAB FRAGMENT, LIGHT CHAIN: A
ANTIBODY S-20-4, FAB FRAGMENT, HEAVY CHAIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

ANTIBODY S-20-4, FAB FRAGMENT, LIGHT CHAIN

ANTIBODY S-20-4, FAB FRAGMENT, HEAVY CHAIN

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