SMTL ID : 1f5m.3 (2 other biounits)

STRUCTURE OF THE GAF DOMAIN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-tetramer

Ligands

18 x BR: BROMIDE ION(Non-covalent)(Non-functional Binders)

BR.1: 5 residues within 4Å: Chain A: K.118, P.120 Chain C: I.112, H.160, K.163 Ligand excluded by PLIP BR.2: 2 residues within 4Å: Chain B: Y.15, S.16 Ligand excluded by PLIP BR.3: 3 residues within 4Å: Chain A: Q.95, K.98, I.123 Ligand excluded by PLIP BR.4: 2 residues within 4Å: Chain B: Q.95, I.123 Ligand excluded by PLIP BR.5: 3 residues within 4Å: Chain A: K.171, N.174, K.175 Ligand excluded by PLIP BR.6: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP BR.7: 4 residues within 4Å: Chain A: N.78, K.108, K.143, T.144 Ligand excluded by PLIP BR.8: 3 residues within 4Å: Chain B: K.21, E.22, V.161 Ligand excluded by PLIP BR.9: 2 residues within 4Å: Chain B: L.29, K.168 Ligand excluded by PLIP BR.10: 5 residues within 4Å: Chain A: I.112, H.160, K.163 Chain C: K.118, P.120 Ligand excluded by PLIP BR.11: 2 residues within 4Å: Chain D: Y.15, S.16 Ligand excluded by PLIP BR.12: 3 residues within 4Å: Chain C: Q.95, K.98, I.123 Ligand excluded by PLIP BR.13: 2 residues within 4Å: Chain D: Q.95, I.123 Ligand excluded by PLIP BR.14: 3 residues within 4Å: Chain C: K.171, N.174, K.175 Ligand excluded by PLIP BR.15: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP BR.16: 4 residues within 4Å: Chain C: N.78, K.108, K.143, T.144 Ligand excluded by PLIP BR.17: 3 residues within 4Å: Chain D: K.21, E.22, V.161 Ligand excluded by PLIP BR.18: 2 residues within 4Å: Chain D: L.29, K.168 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ho, Y.S. et al., Structure of the GAF domain, a ubiquitous signaling motif and a new class of cyclic GMP receptor. EMBO J. (2000)

Release Date

2000-11-10

Peptides

GAF: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

GAF

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