SMTL ID : 1feh.1

FE-ONLY HYDROGENASE FROM CLOSTRIDIUM PASTEURIANUM

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x HC1: 2 IRON/2 SULFUR/5 CARBONYL/2 WATER INORGANIC CLUSTER(Non-covalent)

HC1.1: 18 residues within 4Å: Chain A: A.230, P.231, S.232, I.268, A.272, C.299, S.323, P.324, Q.325, M.353, P.354, C.355, K.358, F.417, G.418, M.497, C.503 Ligands: SF4.2 3 PLIP interactions: 3 interactions with chain A, Hydrogen bonds: A:S.232, A:Q.325 Metal complexes: A:C.503

4 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.2: 10 residues within 4Å: Chain A: C.300, P.301, P.354, C.355, K.358, A.498, C.499, C.503, G.506 Ligands: HC1.1 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.300, A:C.355, A:C.499, A:C.503 SF4.3: 13 residues within 4Å: Chain A: L.140, C.157, T.163, A.165, M.166, F.185, C.190, L.191, L.192, C.193, G.194, Q.195, C.196 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.157, A:C.190, A:C.193, A:C.196 SF4.4: 13 residues within 4Å: Chain A: C.147, L.148, L.149, C.150, G.151, R.152, C.153, I.177, C.200, P.201, V.202, A.204, L.205 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.147, A:C.150, A:C.153, A:C.200 SF4.5: 14 residues within 4Å: Chain A: H.94, E.95, F.96, K.97, C.98, C.101, R.103, R.104, C.107, F.109, L.110, K.146, V.202, A.203 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:H.94, A:C.98, A:C.101, A:C.107

1 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.6: 10 residues within 4Å: Chain A: A.32, L.33, C.34, F.35, K.45, C.46, E.47, C.49, T.60, C.62 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.34, A:C.46, A:C.49, A:C.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Peters, J.W. et al., X-ray crystal structure of the Fe-only hydrogenase (CpI) from Clostridium pasteurianum to 1.8 angstrom resolution. Science (1998)

Release Date

1999-01-13

Peptides

PROTEIN (PERIPLASMIC HYDROGENASE 1): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN (PERIPLASMIC HYDROGENASE 1)

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