SMTL ID : 1fh0.1 (1 other biounit)

CRYSTAL STRUCTURE OF HUMAN CATHEPSIN V COMPLEXED WITH AN IRREVERSIBLE VINYL SULFONE INHIBITOR

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x 0IW: Nalpha-[(4-methylpiperazin-1-yl)carbonyl]-N-[(3S)-1-phenyl-5-(phenylsulfonyl)pentan-3-yl]-L-phenylalaninamide(Covalent)

0IW.1: 17 residues within 4Å: Chain A: Q.19, G.23, C.25, W.26, G.61, Q.63, C.65, N.66, G.67, G.68, F.69, A.136, A.139, L.162, D.163, H.164, W.190 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:A.136, A:L.162 Hydrogen bonds: A:G.68, A:G.68, A:D.163 pi-Stacking: A:F.69

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 1 residues within 4Å: Chain A: K.125 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.125

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Somoza, J.R. et al., Crystal structure of human cathepsin V. Biochemistry (2000)

Release Date

2001-07-30

Peptides

CATHEPSIN V: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CATHEPSIN V

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