SMTL ID : 1fq8.1 (1 other biounit)

X-RAY STRUCTURE OF DIFLUOROSTATINE INHIBITOR CP81,198 BOUND TO SACCHAROPEPSIN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- MAN- MAN- BMA: beta-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-MAN-MAN-BMA.1: 9 residues within 4Å: Chain A: N.68, T.70, D.101, D.132, K.133, V.134, V.135, Y.139, Q.143 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.143, A:D.132

1 x 2Y4: N-[(2S)-1-[[(2S)-1-[[(2S,3R)-1-cyclohexyl-4,4-difluoro-3-hydroxy-5-(methylamino)-5-oxo-pentan-2-yl]amino]-1-oxo-hexan-2 -yl]amino]-1-oxo-3-phenyl-propan-2-yl]morpholine-4-carboxamide(Non-covalent)

2Y4.2: 19 residues within 4Å: Chain A: A.13, Q.14, I.31, D.33, G.35, Y.76, G.77, T.78, T.112, F.113, F.118, D.218, G.220, T.221, S.222, L.223, Q.247, F.294, I.303 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:Q.14, A:I.31, A:I.31, A:Y.76, A:T.78, A:F.113, A:F.118, A:T.221, A:F.294, A:I.303 Hydrogen bonds: A:G.77, A:T.78, A:T.78, A:T.78, A:G.220, A:T.221, A:S.222, A:S.222, A:S.222 Water bridges: A:L.223

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 2 residues within 4Å: Chain A: I.262, N.269 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.269

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cronin, N.B. et al., X-ray structures of five renin inhibitors bound to saccharopepsin: exploration of active-site specificity. J.Mol.Biol. (2000)

Release Date

2000-09-20

Peptides

SACCHAROPEPSIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SACCHAROPEPSIN

Related Entries With Identical Sequence