SMTL ID : 1fuq.1

FUMARASE WITH BOUND 3-TRIMETHYLSILYLSUCCINIC ACID

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

4 x SIF: 3-TRIMETHYLSILYLSUCCINIC ACID(Non-covalent)

SIF.1: 5 residues within 4Å: Chain A: R.126, H.129, P.130, N.131, D.132 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:H.129 Hydrogen bonds: A:N.131, A:D.132 Salt bridges: A:R.126, A:H.129, A:H.129 SIF.3: 6 residues within 4Å: Chain B: M.124, R.126, H.129, P.130, N.131, D.132 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:N.131, B:D.132 Salt bridges: B:R.126, B:H.129, B:H.129 SIF.5: 5 residues within 4Å: Chain C: R.126, H.129, P.130, N.131, D.132 6 PLIP interactions: 6 interactions with chain C Hydrophobic interactions: C:H.129 Hydrogen bonds: C:N.131, C:D.132 Salt bridges: C:R.126, C:H.129, C:H.129 SIF.7: 6 residues within 4Å: Chain D: M.124, R.126, H.129, P.130, N.131, D.132 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:N.131, D:D.132 Salt bridges: D:R.126, D:H.129, D:H.129

4 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 8 residues within 4Å: Chain A: T.100, S.139, S.140, N.141 Chain C: K.324, N.326 Chain D: T.187, H.188 16 PLIP interactions: 10 interactions with chain A, 3 interactions with chain C, 3 interactions with chain D Hydrogen bonds: A:T.100, A:S.139, A:S.140, A:S.140, A:N.141, A:N.141, C:N.326, C:N.326, D:T.187 Water bridges: A:S.98, A:S.98, A:S.98, A:S.98 Salt bridges: C:K.324, D:H.188, D:H.188 CIT.4: 8 residues within 4Å: Chain B: T.100, S.139, S.140, N.141 Chain C: T.187, H.188 Chain D: K.324, N.326 15 PLIP interactions: 3 interactions with chain C, 8 interactions with chain B, 4 interactions with chain D Hydrogen bonds: C:T.187, B:T.100, B:S.139, B:S.140, B:N.141, D:N.326, D:N.326 Salt bridges: C:H.188, C:H.188, D:K.324 Water bridges: B:T.96, B:S.98, B:S.98, B:N.103, D:N.326 CIT.6: 8 residues within 4Å: Chain A: K.324, N.326 Chain B: T.187, H.188 Chain C: T.100, S.139, S.140, N.141 15 PLIP interactions: 3 interactions with chain B, 9 interactions with chain C, 3 interactions with chain A Hydrogen bonds: B:T.187, C:S.139, C:S.140, C:S.140, C:N.141, C:N.141, A:N.326, A:N.326 Salt bridges: B:H.188, B:H.188, A:K.324 Water bridges: C:S.98, C:S.98, C:S.98, C:S.98 CIT.8: 8 residues within 4Å: Chain A: T.187, H.188 Chain B: K.324, N.326 Chain D: T.100, S.139, S.140, N.141 14 PLIP interactions: 7 interactions with chain D, 4 interactions with chain B, 3 interactions with chain A Hydrogen bonds: D:S.139, D:S.140, D:N.141, B:N.326, B:N.326, A:T.187 Water bridges: D:S.98, D:S.98, D:S.98, D:N.103, B:N.326 Salt bridges: B:K.324, A:H.188, A:H.188

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weaver, T. et al., Crystallographic studies of the catalytic and a second site in fumarase C from Escherichia coli. Biochemistry (1996)

Release Date

1997-03-12

Peptides

FUMARASE C: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

FUMARASE C

Related Entries With Identical Sequence