SMTL ID : 1gh0.4 (3 other biounits)

CRYSTAL STRUCTURE OF C-PHYCOCYANIN FROM SPIRULINA PLATENSIS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-12-12-mer

Ligands

36 x CYC: PHYCOCYANOBILIN(Covalent)

CYC.1: 26 residues within 4Å: Chain A: V.59, T.66, P.72, N.73, Y.74, A.75, R.79, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, I.115, I.118, F.122, L.124, W.128, Y.129 Chain D: R.57, I.67, Y.74, T.75, S.76, M.79 Ligand excluded by PLIP CYC.2: 19 residues within 4Å: Chain B: L.66, N.72, A.73, R.78, A.81, C.82, R.84, D.85, M.86, I.88, R.108, C.109, L.113, Y.117, L.120, T.122, P.123, S.126, V.127 Ligand excluded by PLIP CYC.3: 21 residues within 4Å: Chain A: I.24, F.28 Chain B: A.32, N.35, K.36, L.38, D.39, V.40, R.43, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Chain K: Q.33, D.145, V.148 Chain M: K.35 Ligand excluded by PLIP CYC.4: 26 residues within 4Å: Chain C: V.59, T.66, P.72, N.73, Y.74, A.75, R.79, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, L.111, I.118, F.122, L.124, W.128, Y.129 Chain F: R.57, I.67, Y.74, T.75, S.76, M.79 Ligand excluded by PLIP CYC.5: 17 residues within 4Å: Chain D: L.66, N.72, A.73, R.78, A.81, C.82, R.84, D.85, M.86, I.88, R.108, L.113, Y.117, L.120, T.122, S.126, V.127 Ligand excluded by PLIP CYC.6: 20 residues within 4Å: Chain C: I.24, F.28 Chain D: N.35, K.36, L.38, D.39, V.40, R.43, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Chain I: R.32, Q.33, D.145, V.148 Ligand excluded by PLIP CYC.7: 27 residues within 4Å: Chain B: R.57, I.67, Y.74, T.75, S.76, M.79 Chain E: V.59, T.66, P.72, N.73, Y.74, A.75, R.79, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, L.111, I.115, I.118, F.122, L.124, W.128, Y.129 Ligand excluded by PLIP CYC.8: 19 residues within 4Å: Chain F: L.59, L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, I.88, R.108, L.113, Y.117, L.120, T.122, P.123, S.126, V.127 Ligand excluded by PLIP CYC.9: 21 residues within 4Å: Chain E: I.24, F.28 Chain F: A.32, N.35, K.36, L.38, D.39, V.40, R.43, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Chain G: R.32, Q.33, D.145, V.148 Ligand excluded by PLIP CYC.10: 27 residues within 4Å: Chain G: V.59, T.66, P.72, N.73, Y.74, A.75, R.79, G.80, K.83, C.84, R.86, D.87, Y.90, M.94, Y.110, L.111, I.115, F.122, L.124, W.128, Y.129 Chain J: R.57, I.67, Y.74, T.75, S.76, M.79 Ligand excluded by PLIP CYC.11: 21 residues within 4Å: Chain H: L.59, L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, M.86, I.88, R.108, C.109, L.113, T.116, Y.117, L.120, T.122, S.126, V.127 Ligand excluded by PLIP CYC.12: 20 residues within 4Å: Chain E: R.32, Q.33, D.145, V.148 Chain G: I.24, F.28 Chain H: N.35, K.36, L.38, D.39, V.40, R.43, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Ligand excluded by PLIP CYC.13: 27 residues within 4Å: Chain I: V.59, T.66, P.72, N.73, Y.74, A.75, R.79, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, L.111, I.115, I.118, F.122, L.124, W.128, Y.129 Chain L: R.57, I.67, Y.74, T.75, S.76, M.79 Ligand excluded by PLIP CYC.14: 20 residues within 4Å: Chain J: L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, M.86, I.88, R.108, C.109, L.113, Y.117, L.120, T.122, P.123, S.126, V.127 Ligand excluded by PLIP CYC.15: 19 residues within 4Å: Chain C: Q.33, D.145, V.148, E.149 Chain I: F.28 Chain J: N.35, K.36, L.38, D.39, V.40, R.43, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Ligand excluded by PLIP CYC.16: 27 residues within 4Å: Chain H: R.57, I.67, Y.74, T.75, S.76, M.79 Chain K: V.59, T.66, P.72, N.73, Y.74, A.75, R.79, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, L.111, I.115, I.118, F.122, L.124, W.128, Y.129 Ligand excluded by PLIP CYC.17: 17 residues within 4Å: Chain L: L.66, N.72, A.73, R.78, A.81, C.82, R.84, D.85, M.86, I.88, R.108, L.113, Y.117, L.120, T.122, S.126, V.127 Ligand excluded by PLIP CYC.18: 19 residues within 4Å: Chain A: Q.33, D.145, V.148 Chain K: I.24, F.28 Chain L: N.35, K.36, L.38, D.39, V.40, R.43, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Ligand excluded by PLIP CYC.19: 26 residues within 4Å: Chain M: V.59, T.66, P.72, N.73, Y.74, A.75, R.79, G.80, K.83, C.84, R.86, D.87, Y.90, Y.91, Y.110, L.111, I.115, F.122, L.124, W.128, Y.129 Chain P: R.57, I.67, Y.74, T.75, S.76 Ligand excluded by PLIP CYC.20: 20 residues within 4Å: Chain N: L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, M.86, I.88, R.108, C.109, L.113, Y.117, L.120, T.122, P.123, S.126, V.127 Ligand excluded by PLIP CYC.21: 21 residues within 4Å: Chain A: K.35 Chain M: I.24, F.28 Chain N: A.32, N.35, K.36, L.38, D.39, V.40, R.43, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Chain W: Q.33, D.145, V.148 Ligand excluded by PLIP CYC.22: 26 residues within 4Å: Chain O: V.59, T.66, P.72, N.73, Y.74, A.75, R.79, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, L.111, I.115, F.122, L.124, W.128, Y.129 Chain R: R.57, I.67, Y.74, T.75, S.76, M.79 Ligand excluded by PLIP CYC.23: 17 residues within 4Å: Chain P: N.72, A.73, R.78, A.81, C.82, R.84, D.85, M.86, I.88, R.108, L.113, Y.117, L.120, T.122, P.123, S.126, V.127 Ligand excluded by PLIP CYC.24: 20 residues within 4Å: Chain O: I.24, F.28 Chain P: N.35, K.36, L.38, D.39, V.40, R.43, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Chain U: R.32, Q.33, D.145, V.148 Ligand excluded by PLIP CYC.25: 27 residues within 4Å: Chain N: R.57, I.67, Y.74, T.75, S.76, M.79 Chain Q: V.59, Y.60, T.66, P.72, N.73, Y.74, A.75, R.79, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, L.111, I.118, F.122, L.124, W.128, Y.129 Ligand excluded by PLIP CYC.26: 21 residues within 4Å: Chain R: L.59, L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, M.86, I.88, R.108, L.113, T.116, Y.117, L.120, T.122, P.123, S.126, V.127 Ligand excluded by PLIP CYC.27: 19 residues within 4Å: Chain Q: F.28 Chain R: N.35, K.36, L.38, D.39, V.40, R.43, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Chain S: Q.33, D.145, V.148, E.149 Ligand excluded by PLIP CYC.28: 26 residues within 4Å: Chain S: V.59, T.66, P.72, N.73, Y.74, A.75, R.79, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, L.111, I.118, F.122, L.124, W.128, Y.129 Chain V: R.57, I.67, Y.74, T.75, S.76, M.79 Ligand excluded by PLIP CYC.29: 20 residues within 4Å: Chain T: L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, M.86, I.88, Y.92, R.108, C.109, L.113, Y.117, L.120, P.123, S.126, V.127 Ligand excluded by PLIP CYC.30: 22 residues within 4Å: Chain Q: R.32, Q.33, D.145, V.148, E.149 Chain S: I.24, F.28 Chain T: A.32, N.35, K.36, D.39, V.40, R.43, V.142, N.143, D.144, P.145, I.148, T.149, P.150, G.151, C.153 Ligand excluded by PLIP CYC.31: 26 residues within 4Å: Chain U: V.59, T.66, P.72, N.73, Y.74, A.75, R.79, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, I.115, I.118, F.122, L.124, W.128, Y.129 Chain X: R.57, I.67, Y.74, T.75, S.76, M.79 Ligand excluded by PLIP CYC.32: 18 residues within 4Å: Chain V: L.66, N.72, A.73, R.78, A.81, C.82, R.84, D.85, M.86, I.88, R.108, L.113, Y.117, L.120, T.122, P.123, S.126, V.127 Ligand excluded by PLIP CYC.33: 21 residues within 4Å: Chain O: Q.33, D.145, V.148 Chain U: I.24, F.28 Chain V: A.32, N.35, K.36, L.38, D.39, V.40, N.42, R.43, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153 Ligand excluded by PLIP CYC.34: 26 residues within 4Å: Chain T: R.57, I.67, Y.74, T.75, S.76, M.79 Chain W: V.59, T.66, P.72, N.73, Y.74, A.75, R.79, G.80, K.83, C.84, R.86, D.87, Y.90, Y.110, I.115, I.118, F.122, L.124, W.128, Y.129 Ligand excluded by PLIP CYC.35: 17 residues within 4Å: Chain X: L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, M.86, I.88, R.108, L.113, L.120, T.122, S.126, V.127 Ligand excluded by PLIP CYC.36: 22 residues within 4Å: Chain M: R.32, Q.33, D.145, V.148 Chain W: F.28 Chain X: A.32, N.35, K.36, L.38, D.39, V.40, N.42, R.43, V.142, N.143, D.144, I.148, T.149, P.150, G.151, C.153, L.156 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, X.Q. et al., Structure of C-phycocyanin from Spirulina platensis at 2.2 A resolution: a novel monoclinic crystal form for phycobiliproteins in phycobilisomes. Acta Crystallogr.,Sect.D (2001)

Release Date

2001-06-06

Peptides

C-PHYCOCYANIN ALPHA SUBUNIT: ACEGIKMOQSUW
C-PHYCOCYANIN BETA SUBUNIT: BDFHJLNPRTVX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
E

G
G

I
I

K
K

M
M

O
O

Q
Q

S
S

U
U

W
W

B
B

D
D

F
F

H
H

J
J

L
L

N
N

P
P

R
R

T
T

V
V

X
X

C-PHYCOCYANIN ALPHA SUBUNIT

C-PHYCOCYANIN BETA SUBUNIT

Related Entries With Identical Sequence