SMTL ID : 1h4p.1 (1 other biounit)

Crystal structure of exo-1,3-beta glucanse from Saccharomyces cerevisiae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA- MAN- MAN- BMA- BMA- MAN- BMA- BMA: beta-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-beta-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[beta-D-mannopyranose-(1-2)-beta-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-functional Binders)

NAG-NAG-BMA-MAN-MAN-BMA-BMA-MAN-BMA-BMA.1: 5 residues within 4Å: Chain A: E.76, Q.118, G.121, W.122, N.125 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Q.118

1 x NAG- NAG- BMA- BMA- BMA: beta-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-functional Binders)

NAG-NAG-BMA-BMA-BMA.2: 7 residues within 4Å: Chain A: K.204, P.233, N.235, Y.236, D.238, D.239, N.285 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.238

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain A: E.243, W.248, G.249, V.250, H.288, W.289 Ligands: GOL.5 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.249, A:V.250, A:W.289 GOL.4: 7 residues within 4Å: Chain A: E.25, Y.27, H.135, N.146, F.260, W.369, W.379 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.25, A:H.135 Water bridges: A:E.25 GOL.5: 7 residues within 4Å: Chain A: D.5, E.243, S.287, H.288, W.289, R.363 Ligands: GOL.3 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.5, A:E.286, A:W.289, A:R.363 Water bridges: A:H.6 GOL.6: 4 residues within 4Å: Chain A: N.81, Q.85, Y.371, Q.382 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.85, A:Q.85, A:Q.382

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Taylor, S.C. et al., The Er Protein Folding Sensor Udp-Glucose Glycoprotein:Glucosyltransferase Modifies Substrates Distant to Local Changes in Glycoprotein Conformation. Nat.Struct.Mol.Biol. (2004)

Release Date

2003-10-02

Peptides

GLUCAN 1,3-BETA-GLUCOSIDASE I/II: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GLUCAN 1,3-BETA-GLUCOSIDASE I/II

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