SMTL ID : 1hlq.1

CRYSTAL STRUCTURE OF RHODOFERAX FERMENTANS HIGH POTENTIAL IRON-SULFUR PROTEIN REFINED TO 1.45 A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-trimer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: K.26, T.33, K.34 Ligands: SO4.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.34 Salt bridges: A:K.26, A:K.34 SO4.2: 1 residues within 4Å: Chain A: K.23 3 PLIP interactions: 3 interactions with chain A Water bridges: A:D.20, A:K.23 Salt bridges: A:K.23 SO4.3: 2 residues within 4Å: Chain A: K.34 Ligands: SO4.1 3 PLIP interactions: 3 interactions with chain A Water bridges: A:K.34, A:K.34 Salt bridges: A:K.34 SO4.5: 3 residues within 4Å: Chain B: K.26, T.33, K.34 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.34 Salt bridges: B:K.26, B:K.34 SO4.7: 4 residues within 4Å: Chain C: K.26, H.32, T.33, K.34 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:K.34 Salt bridges: C:K.26, C:K.34

3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.4: 12 residues within 4Å: Chain A: Y.17, C.38, C.41, L.43, Y.44, C.54, L.56, F.57, V.62, C.68, A.70, W.71 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.38, A:C.41, A:C.54, A:C.68 SF4.6: 10 residues within 4Å: Chain B: Y.17, C.38, C.41, L.43, Y.44, C.54, L.56, F.57, C.68, W.71 4 PLIP interactions: 4 interactions with chain B, Metal complexes: B:C.38, B:C.41, B:C.54, B:C.68 SF4.8: 12 residues within 4Å: Chain C: Y.17, C.38, C.41, L.43, Y.44, C.54, L.56, F.57, V.62, C.68, A.70, W.71 4 PLIP interactions: 4 interactions with chain C, Metal complexes: C:C.38, C:C.41, C:C.54, C:C.68

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gonzalez, A. et al., Structure of Rhodoferax fermentans high-potential iron-sulfur protein solved by MAD. Acta Crystallogr.,Sect.D (2003)

Release Date

2003-06-03

Peptides

HIGH-POTENTIAL IRON-SULFUR PROTEIN: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

HIGH-POTENTIAL IRON-SULFUR PROTEIN