SMTL ID : 1hp0.1

CRYSTAL STRUCTURE OF AN INOSINE-ADENOSINE-GUANOSINE-PREFERRING NUCLEOSIDE HYDROLASE FROM TRYPANOSOMA VIVAX IN COMPLEX WITH THE SUBSTRATE ANALOGUE 3-DEAZA-ADENOSINE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.22, D.27, T.149, D.273 Ligands: AD3.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.22, A:D.27, A:T.149, A:D.273, H2O.1 CA.3: 5 residues within 4Å: Chain B: D.22, D.27, T.149, D.273 Ligands: AD3.4 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.22, B:D.27, B:T.149, B:D.273, H2O.9

2 x AD3: 3-DEAZA-ADENOSINE(Non-covalent)

AD3.2: 16 residues within 4Å: Chain A: N.24, D.26, D.27, D.52, F.91, W.95, T.149, M.176, N.185, E.196, W.197, N.198, Y.269, W.272, D.273 Ligands: CA.1 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:D.26, A:N.185, A:N.185, A:E.196, A:N.198, A:Y.269 pi-Stacking: A:W.95, A:W.272, A:W.272 AD3.4: 14 residues within 4Å: Chain B: N.24, D.26, D.27, D.52, W.95, T.149, M.176, N.185, E.196, N.198, Y.269, W.272, D.273 Ligands: CA.3 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:N.185, B:N.198, B:Y.269 Water bridges: B:L.25 pi-Stacking: B:W.95, B:W.272, B:W.272

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Versees, W. et al., Structure and function of a novel purine specific nucleoside hydrolase from Trypanosoma vivax. J.Mol.Biol. (2001)

Release Date

2001-12-12

Peptides

INOSINE-ADENOSINE-GUANOSINE-PREFERRING NUCLEOSIDE HYDROLASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

INOSINE-ADENOSINE-GUANOSINE-PREFERRING NUCLEOSIDE HYDROLASE

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