SMTL ID : 1ibg.2 (1 other biounit)

STRUCTURE AND SPECIFICITY OF THE ANTI-DIGOXIN ANTIBODY 40-50

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-oligomer

Ligands

2 x CU: COPPER (II) ION(Non-covalent)

CU.1: 3 residues within 4Å: Chain A: I.1 Chain C: E.157, H.192 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:H.192 CU.3: 3 residues within 4Å: Chain A: E.157, H.192 Chain C: I.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.192

2 x OBN: OUABAIN(Non-covalent)

OBN.2: 16 residues within 4Å: Chain A: T.30, S.31, H.35, S.94, R.95, Y.97, L.99 Chain B: H.34, L.49, W.51, F.97, F.99, Y.102, Y.103, Y.105, V.107 16 PLIP interactions: 6 interactions with chain A, 10 interactions with chain B Hydrophobic interactions: A:Y.97, B:W.51, B:F.97, B:F.99, B:Y.102, B:Y.102, B:Y.102, B:Y.105, B:Y.105 Hydrogen bonds: A:T.30, A:S.31, A:S.31, A:S.94, A:R.95, B:Y.103 Salt bridges: B:H.34 OBN.4: 16 residues within 4Å: Chain C: T.30, S.31, H.35, S.94, R.95, Y.97, L.99 Chain D: H.34, L.49, W.51, F.97, F.99, Y.102, Y.103, Y.105, V.107 17 PLIP interactions: 8 interactions with chain C, 9 interactions with chain D Hydrophobic interactions: C:Y.97, D:W.51, D:F.97, D:F.99, D:Y.102, D:Y.102, D:Y.102, D:Y.105, D:Y.105 Hydrogen bonds: C:T.30, C:T.30, C:S.31, C:S.31, C:S.94, C:R.95, C:R.95 Salt bridges: D:H.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jeffrey, P.D. et al., Structure and Specificity of the Anti-Digoxin Antibody 40-50. J.Mol.Biol. (1995)

Release Date

1995-05-08

Peptides

IGG2B-KAPPA 40-50 FAB (LIGHT CHAIN): AC
IGG2B-KAPPA 40-50 FAB (HEAVY CHAIN): BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

C
L

B
H

D
H

IGG2B-KAPPA 40-50 FAB (LIGHT CHAIN)

IGG2B-KAPPA 40-50 FAB (HEAVY CHAIN)

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