SMTL ID : 1ize.1

Crystal structure of Aspergillus oryzae Aspartic proteinase complexed with pepstatin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x IVA- VAL- VAL- STA- ALA- STA: Pepstatin(Non-covalent)

IVA-VAL-VAL-STA-ALA-STA.1: 21 residues within 4Å: Chain A: E.15, D.31, D.33, G.35, S.36, I.73, S.74, Y.75, G.76, D.77, S.79, E.111, L.121, F.190, D.214, G.216, T.217, T.218, F.275, F.295, I.297 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:I.73, A:Y.75, A:Y.75, A:L.121, A:F.190, A:F.275, A:F.295, A:I.297 Hydrogen bonds: A:D.33, A:G.35, A:S.74, A:Y.75, A:G.76, A:D.77, A:D.77, A:G.216, A:T.218, A:T.218, A:T.218

1 x MAN: alpha-D-mannopyranose(Post Translational Modification)

MAN.2: 3 residues within 4Å: Chain A: T.3, G.4, Y.169 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kamitori, S. et al., Crystal structures of Aspergillus oryzae aspartic proteinase and its complex with an inhibitor pepstatin at 1.9A resolution. J.Mol.Biol. (2003)

Release Date

2003-03-04

Peptides

aspartic proteinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

aspartic proteinase

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